Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30300g00017 ATGTTTCTTGTTCGTTGGATTTGTTTGTTGTTTGTGTTGGTAAATTCAGGATTTGTAGAGTTAGTTAATGGTCAGTATTACCGAAGAGTTGGAGACAAAATCCTTCCATTCAGAGAAATTGTTGTTGATTCTTTAGGACATGGCAACTTCTCTACCATTCAATCTGCAATTGATTCTGTCCCTTCCAACAATAAGTATTGGGTTTCAATCAAAGTCAAGGCTGGTATTTACAGGGAGAAAGTGAAGATTCCAATTGAAAAGCCATACATAATATTGAAGGGAGATGGAAAGAGGAAAACGTGGGTTGAATGGAGTGACCATAATGCAACTGCTCAGAGTCCCACGTTCCAAACCATGGCTGATAATATCATCGTCAAATCAATCTCTTTTAGGAATTCATACAACAATCCAATAAATAAGAAGCCCAAGGTTCCTGCAGTAGCTGCAATGGTTAGTGGAGACAAGTCTTATTTTTATAGAGTTGGTTTCTTTGGGTTGCAAGACACTTTATGGGATGATCAAGGAAGACATTACTACAAGCTTTGTACAATTCAAGGTGCCATTGATTTTATCTTTGGTGCTGGCCAGTCTTTGTTTGAGAGGTGTAGCATATCTGTTATTGGAGGGGCCTTAGAAGCAGGGTTTGTAGGTTATATAACAGCACAAGGGAGAACGAATCCAAATGATTCAAATGGGTTTGTGTTTAAGAACTGCAATGTCTTTGGAAATGGTACAACTTTCTTGGGAAGGCCTTGGAGACCTTATGCTAGAGTTCTTTTCTACAACACAAGCATGTCCAACGTTGTACAACCTTCTGGTTGGGAGCCATGGAAATTCTTTCAACACGAGAATCACATTACATTTGCAGAGTATGGAAATTTCGGTCCGGGTTCTAATACTTCCAGACGAGTAAAATGGATTAAAAAGTTGGATTTAGAGACAGTTAATATGATGACAAGTATGAATTTCATAGACTCCCAAGAATGGCTTGATCAGAACCAACAGTTCTGA 1011 0.3867 MFLVRWICLLFVLVNSGFVELVNGQYYRRVGDKILPFREIVVDSLGHGNFSTIQSAIDSVPSNNKYWVSIKVKAGIYREKVKIPIEKPYIILKGDGKRKTWVEWSDHNATAQSPTFQTMADNIIVKSISFRNSYNNPINKKPKVPAVAAMVSGDKSYFYRVGFFGLQDTLWDDQGRHYYKLCTIQGAIDFIFGAGQSLFERCSISVIGGALEAGFVGYITAQGRTNPNDSNGFVFKNCNVFGNGTTFLGRPWRPYARVLFYNTSMSNVVQPSGWEPWKFFQHENHITFAEYGNFGPGSNTSRRVKWIKKLDLETVNMMTSMNFIDSQEWLDQNQQF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30300g00017 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 38 331 - -
Stsc30300g00017 336 SUPERFAMILY Pectin lyase-like 38 332 IPR011050 -
Stsc30300g00017 336 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Stsc30300g00017 336 Gene3D - 37 335 IPR012334 -
Stsc30300g00017 336 FunFam Pectinesterase 36 334 - -
Stsc30300g00017 336 Pfam Pectinesterase 40 326 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30300g00017 Stsc-Chr30300 71670 74154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30300g00017 38 278 Carbohydrate Esterase AT2G19150 47.934 8.89e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30300g00017 - - gmx:100819252 491.115