Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30300g00014 ATGCAAAACTCACTCTACAACACCTACGTCAAACTTCTCGCCTTCGATCTTCTCTCTCTCACCCAAACCCCTTCTTCTTCTTCTTCGGTCTCAGAACCTACGTTCTCGAGAAGAGGCATCCCTCTCTCGCGAGCAGAGACACTTGGCACCGTCACACTCCGCGACTACAAGCCTCACAAGTTCCTCCGCTTCCTTATCGACGACGGCACCGCCTCCGTACCATGCATCCTCTGGCTCAACCACATGACTTCACCCTACCTTGCTCGCCGTCGCCGCCCCGACGACCTCCGACTCATCGCCGACTCCGCTGCCAGGTTCGCCGCCGAGGTTAGGGTTGGTGTGGTGGCGAGAGTGAGGGGAAGGATCGGGTGCTACAACGGGAAGGTGCAGATCACGGTTTCCGATGTCTTCGTTGAGAGGGATCCCAATGCGGAGATACTCCACTGCCTCGAATGTATCAATCTTGCTCTTAATTGCTACAATGTTTTGCCTGGGCTTGGGCCAGGGCCCGATCCGGCCCTGGTCCCGGGCCCGTCTTCTATATGCAAGGAGAATCAAGCAGAAAATGCAGAATGA 576 0.5608 MQNSLYNTYVKLLAFDLLSLTQTPSSSSSVSEPTFSRRGIPLSRAETLGTVTLRDYKPHKFLRFLIDDGTASVPCILWLNHMTSPYLARRRRPDDLRLIADSAARFAAEVRVGVVARVRGRIGCYNGKVQITVSDVFVERDPNAEILHCLECINLALNCYNVLPGLGPGPDPALVPGPSSICKENQAENAE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30300g00014 191 Gene3D - 1 163 IPR012340 -
Stsc30300g00014 191 SUPERFAMILY Nucleic acid-binding proteins 27 157 IPR012340 -
Stsc30300g00014 191 PANTHER REPLICATION PROTEIN A-RELATED 6 161 IPR040260 -
Stsc30300g00014 191 Pfam OB-fold nucleic acid binding domain 49 136 IPR004365 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30300g00014 Stsc-Chr30300 64687 65299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30300g00014 39 155 Core DNA Replication Machinery Family AT2G24490 27.350 5.57e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30300g00014 K23312 - jre:109018253 188.348