Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc302g00006 ATGGCCTTTGAGGAATCTGAGTTTATGATTCCGGAGCTAGAAATAGAGGAAAACCTGATCGCCGCAGCGAGGCACGTTGTGAGGGCATTAGGATCAAAGAAGAATCTAACCGGCGACGCGAAGAAGATTCTAGCAGATCTCGGCTCTCAGCTGCATTCAATTAGTATAGTAAGTTCAAAGGAAGAACAAGAACAGCAAGAACAAGAAGAAAGGCTGAAATTCATTGAGGAGGTAATCATGAATCTGGAGGAGGATCAGATCGAGTATTTAAACGCCGCGGACGAAGCGCGACAGTTGATCGAGAAGTTTGAGAGCTTACACATAAGCCAAGAGGACAAAGAATATAAGCTTTTGAATAGAGCTTATAGCATTCTCCAAACCGCCATGTCTCAGATCGAACAAGTTTTCAAGAACTTGCTTAGCCAGAACATGCAGCCTTTTGAGCCTGAATATGTGTCGTTTAGATCAAACGAAGAGGACCTTCACCTCGCCGACGAGAATTCCGTGACGTCGAACGAATCGGCCGAATCGTTCCGGCGAGACAGCATGAACAAAGCCTCGGAGGATTACATTCTTGATCTGGTTAGTCCAGATGTGATTCCGCATCTTCGGTGCATTGCTGATTTGATGTTTGCTTCTGGTTATGGCCAGGAATGTTGCCATGCTTACACCATGGCGCGAAGGGAAGCGTTGGAACAATGCTTCGCCATTCTTGAAATCGAGAAATTCAGCATCGAGAATGTTCTGAAAATGGAATGGAATACTCTGAATTCCAAGATCAAGCGGTGGATTTGGGCGGTGAGAGTGTTTGTTAGGGTTTATCTTGCAAGCGAGAAGTGGCTTTCTGACCGGATTTTCGGGGAAGGCGAACCGGCAAGCCAAGCTTGTTTTGTTGATGTGTCAAAGCCTTCAATGTTGAAGCTTCTCAACTTCGCGGGAGCCGTTTCTATCGGCCCCCGCAAACCAGAGAAGCTGTTCAAAATCCTTGACATGTATGAGGCCCTTTCGGGCCTTATGCCGGAGATTAACGACTTGTTTCAAGACAAGGCTGGCTTGTTAGTTCGACGCGAATTTCTCGAGGCTATATCGCAATTAGGCGATTGCGTGAGAGGCACGTTTCTTGAATTCGAGCATGCCATTGCATCAGACGTTTCAACAAGTCCTTTTGTTGGAGGTGGAATCCATCCATTAACGAGATATGTGATGAACTATCTCGAAACTCTGACTGATTACGGCGAGATGCTTAATAGGCTTCTTAGGGACAAAGGAGAAACAGAGGAGGGAGCGTCGATGGAGCTCCACTTCCGGTCCGTCGCGTCGATCCTAGAATGCAATCTTGATGAAAAGTCTAAGTTATACAAAGATCTTCCATTGCAGCACCTCTTCTTAGTGAATAATATCCAGTATATGACTAGAAAGGTTAAAGGATCCGATGAACTCGGGTCGATTTTCGGAGATGACTGGATCCGAAAGCGAAAATCAAAGTATAGGCAGCATGCATTGAATTACCAGAGGTATAGTTTGAGTTGCATTCTTTCGTTGCTTAAAGATGATGGAATCCAAATGCAGGGTTGTAGTACTAGTAGTAATGTTGTGTCAAAGAATGTTCTTAAAGAAAAGTTAAGAAGGTTCAACATTGCATTTGAGGATCTTTATAGGGTGCAAACAGGTTGGAACATTCCGGATTCTCAGCTTAGTGAAGAACTGCGAATCTCGCTGTCTTTGAAAGTGGTTCAAGCATATAGAACATTTGTAGGGAGGCATAGTAATCAGATTAGTGAGAAGCATGTTAAATATAGTGCTGAAGATTTAGAAGGATATATTTTGGATTTCTTTGAGGGAGCTGCAAAATCATTACATAGTCCCCGGAAGAGTTAA 1878 0.4409 MAFEESEFMIPELEIEENLIAAARHVVRALGSKKNLTGDAKKILADLGSQLHSISIVSSKEEQEQQEQEERLKFIEEVIMNLEEDQIEYLNAADEARQLIEKFESLHISQEDKEYKLLNRAYSILQTAMSQIEQVFKNLLSQNMQPFEPEYVSFRSNEEDLHLADENSVTSNESAESFRRDSMNKASEDYILDLVSPDVIPHLRCIADLMFASGYGQECCHAYTMARREALEQCFAILEIEKFSIENVLKMEWNTLNSKIKRWIWAVRVFVRVYLASEKWLSDRIFGEGEPASQACFVDVSKPSMLKLLNFAGAVSIGPRKPEKLFKILDMYEALSGLMPEINDLFQDKAGLLVRREFLEAISQLGDCVRGTFLEFEHAIASDVSTSPFVGGGIHPLTRYVMNYLETLTDYGEMLNRLLRDKGETEEGASMELHFRSVASILECNLDEKSKLYKDLPLQHLFLVNNIQYMTRKVKGSDELGSIFGDDWIRKRKSKYRQHALNYQRYSLSCILSLLKDDGIQMQGCSTSSNVVSKNVLKEKLRRFNIAFEDLYRVQTGWNIPDSQLSEELRISLSLKVVQAYRTFVGRHSNQISEKHVKYSAEDLEGYILDFFEGAAKSLHSPRKS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc302g00006 625 Pfam Exo70 exocyst complex subunit 261 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc302g00006 625 SUPERFAMILY Cullin repeat-like 85 613 IPR016159 -
Stsc302g00006 625 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 614 IPR004140 GO:0000145|GO:0006887
Stsc302g00006 625 Gene3D Exocyst complex component Exo70 73 621 - -
Stsc302g00006 625 Coils Coil 58 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc302g00006 Stsc-Chr302 34275 36372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc302g00006 12 621 EXO70 exocyst subunit family AT3G29400 43.247 1.38e-169 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc302g00006 K07195 - adu:107471287 948.732