Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc302g00002 ATGTTTAGTCCTCTAGCATGGCCTACCGAACTTCGCTACAGTTACTATGTAGCTTTCAGACCTGCTGCACGCCTGGTGTTTGATGAAAGTGGTGAGATATATGCAGAGGCAAAGAATGGTACTAGAACAACACTACAAGAAGATCCTAACTGGAGAGCCGATTTAGTTCTTGATACTAGGAACAATTACTATAGAGCAACGCTTGATTACTTTGGAGTTTTAACTCAGTATGTTCATTCCAAGGACTCGAATTCTCAGCAGCAAGGGTGGAGAATTTTAAGGTACATTCCTGGTGACATTTGCACAAGTGTTCTTGATGGTTATTATGGTTATGGAAGTGGTGCATGTGGTTACAATAGCTATTGCTCCATGATAGAACAGAGGCCTACTTGCACTTGCCTTGATGGATATACTCTGATTGATCCAAGCAATGTGTTTGGTGGATGCCAACCAAATTTCACACTTGGTTGTGGAGGTGATGAAGAATTACAAGCGCGCCCAGAAGACCCATATACCTTTAAGGTTTTGAATGATGTGGATTTTCCCCTTAATGATTATGAGAAGATTCAACCTTACACTCAAGATGTGTGCCAACAAGACTGTTTAAAAGATTGCATTTGTGCTGTTGCAATCTATGACAATCAAACCTGCTGGAAGAAGAGGTTGCCACTTTCTTTTGGAAAAGCAAAAAGTGGAGGTCAAACAATACTTATCAAAACAAGAGTTGCACCTCTTGGCACTCCCCCTGGTTCTAAATCAAAGAAAGATAAGCCAGTTTTTATTGGGTTACTTACTGGATTGCTTGTCATCAATGTTGTACTCTTGGCTGCAGTTCTTTCGGTTATTCGCCTGAAGAAGAGAAAAAGGGAAATCAAAGTCTCAAGTCTTCTAGAAACAAATGTGCATTCCTTTAGCTATGAAGCATTGATGGATGCGACATGGGGTTTCACCGAAGAACTGGGAAGGGGTTCGTTTGGAATTGTTTACAAAGGGACCATAGAATCAAGGTTTTATAATGAGGTGGCAGTCAAGAAGCTTGATGGATTAGCAGAAGGACGAGAAAAGGAATTCAAGGCTGAGTTGAATGCCATTGGTAAAACCTCTCACAAGAATTTGGTAAGGCTGATTGGATTCTGTGATGAGGGAACCAACAGATTGCTTGTCTATGAGTTCATGAGCAACGGCTCTCTGGCAAACTTCCTATTTGCACAAGCCAAACCAAATTGGGATCTAAGGGTAAGGTTTGCTTTGGGGATTGCAAGAGGATTAGTGTACCTGCATGAAGAGTGTGACACTCCTATCATTCACTGTGACATAAAACCTCAGAATATACTCATAGATGATAACTTCAATGCGAAGATATCTGACTTCGGGTTGGCCAAGTTGTTGTTGTCTGACCAGAGCAGGACCAACACCATGATCCGTGGAACAAGAGGTTATGTTGCTCCGGAATGGTTCAGGAATGTTCCGGTGACAGTTAAGGTGGATGTTTATAGCTTTGGCGTGATGTTACTAGAGATCATTTGCTGCAGAAGGAGTGTGCTGATGTTGGAGTCCGGGGAGGAAGAGAAGGCAGTGCTGACTGATTGGGCTTATGATTGCTATTTAGGAAGCAGAATAAATGCTTTGGTGGATGATGATGATAAGGGAGCTCTAGCTGACAAGGGAAGGTTACAAAGGTGGGTGAAGATAGCAATTTGGTGCATTCAAGAGCATCATGAAATGAGGCCAACAATGGGGATGGTCTTGCAGATGCTTCAAGGCTTTGTTGAAGTCTCTGATCCACCATCACCCTTTTCTTGA 1803 0.4237 MFSPLAWPTELRYSYYVAFRPAARLVFDESGEIYAEAKNGTRTTLQEDPNWRADLVLDTRNNYYRATLDYFGVLTQYVHSKDSNSQQQGWRILRYIPGDICTSVLDGYYGYGSGACGYNSYCSMIEQRPTCTCLDGYTLIDPSNVFGGCQPNFTLGCGGDEELQARPEDPYTFKVLNDVDFPLNDYEKIQPYTQDVCQQDCLKDCICAVAIYDNQTCWKKRLPLSFGKAKSGGQTILIKTRVAPLGTPPGSKSKKDKPVFIGLLTGLLVINVVLLAAVLSVIRLKKRKREIKVSSLLETNVHSFSYEALMDATWGFTEELGRGSFGIVYKGTIESRFYNEVAVKKLDGLAEGREKEFKAELNAIGKTSHKNLVRLIGFCDEGTNRLLVYEFMSNGSLANFLFAQAKPNWDLRVRFALGIARGLVYLHEECDTPIIHCDIKPQNILIDDNFNAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFRNVPVTVKVDVYSFGVMLLEIICCRRSVLMLESGEEEKAVLTDWAYDCYLGSRINALVDDDDKGALADKGRLQRWVKIAIWCIQEHHEMRPTMGMVLQMLQGFVEVSDPPSPFS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc302g00002 600 Pfam Protein kinase domain 317 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc302g00002 600 Gene3D Transferase(Phosphotransferase) domain 1 392 594 - -
Stsc302g00002 600 SUPERFAMILY Protein kinase-like (PK-like) 292 586 IPR011009 -
Stsc302g00002 600 Gene3D Phosphorylase Kinase; domain 1 277 391 - -
Stsc302g00002 600 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 21 597 - -
Stsc302g00002 600 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 392 594 - -
Stsc302g00002 600 ProSitePatterns Protein kinases ATP-binding region signature. 320 345 IPR017441 GO:0005524
Stsc302g00002 600 ProSiteProfiles Protein kinase domain profile. 314 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc302g00002 600 FunFam S-receptor-like serine/threonine-protein kinase 283 391 - -
Stsc302g00002 600 CDD PAN_AP_plant 153 240 - -
Stsc302g00002 600 SMART serkin_6 314 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc302g00002 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc302g00002 Stsc-Chr302 9214 11083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc302g00002 249 597 Receptor kinase-like Gene Family AT1G56120 38.873 7.09e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc302g00002 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc302g00002 - - adu:107487498 902.894