Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30299g00012 ATGCCAACGATATCGAACTTCTACACCATGAAAGATGCATCGAAGCACAACACCAAAGCCGATTGCTGGATCGTTGTCGATGGAAAGGTATATGATGTAACACAATATTTGGATGATCATCCAGGTGGAGATGACGTAATCCTCGCCGCAACTGGGAGAGACGCAACAGATGATTTTGAAGATGCCGGACACAGCAAAAGCGCAAGAGAACAAATGGAGGAGTACTTCGTCGGTGAGCTTGACACATCGGCTCCACCTTCCACTGAGAAAAGTTATCATGTGAAGTTTGTGCAGTTGGCAAAGCAATACTGGGCTGTTCCTGTAGCTGCTGTTGGTATCTCAGTAGTAGTTGGATTTTTATACTTGCGTAAGAAGTAA 378 0.4497 MPTISNFYTMKDASKHNTKADCWIVVDGKVYDVTQYLDDHPGGDDVILAATGRDATDDFEDAGHSKSAREQMEEYFVGELDTSAPPSTEKSYHVKFVQLAKQYWAVPVAAVGISVVVGFLYLRKK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30299g00012 125 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Stsc30299g00012 125 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Stsc30299g00012 125 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 87 IPR036400 -
Stsc30299g00012 125 Gene3D - 3 85 IPR036400 -
Stsc30299g00012 125 PANTHER CYTOCHROME B5 5 121 - -
Stsc30299g00012 125 SMART Cyt_b5_2 8 81 IPR001199 -
Stsc30299g00012 125 FunFam Cytochrome b5 type B 3 85 - -
Stsc30299g00012 125 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Stsc30299g00012 125 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Stsc30299g00012 125 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Stsc30299g00012 125 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Stsc30299g00012 125 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30299g00012 Stsc-Chr30299 96122 101086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30299g00012 1 124 NADPH P450 reductases AT1G26340 55.970 3.87e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30299g00012 K23490 - gmx:100500537 195.667