Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30298g00014 ATGGTAAAGGAATTGGTTTCAACAGAGAAGTCCAGCTTTGTAAACAATCAGGAGAAGAATAATCCTCAAGGATGCATGTGGGGCTTATTTCATATTCTGGATTACCATCATTGGCATGTGAGAAAGGTGTTTGCTAACAAAAAGAAAAGACATGCCAGATATAAGAGAAACACCATTTTGCATAACCAAGGTGAAGAATATGGAAGCCCAGAAGCAGAAAAACTGCTGGTTGCGCAAGGTGGCGAAAAAGGCGAAAGGTACCAAAAACATGAGAAAAAAGAGCAAGACACAGAAATTAGGCCTAAAGAAGGAAACTACAAAGGTGAATATGCACTTCATGTGGAGAAAGATGGCAAGAAAACAGTACAAGCTTCCCTCCTTAACCATGACAGAGACACTGCCAATGTGTATAAGAATCATGGTGATGTTTTGGGGGTAGTTAGAGTGGAGAAGGATTTACTCCTTAAATTTCTAAGAGAATTAGACTCTGAAGGGAAAAACCTTCATCAAGCTTCTCACCCTGAAGCAAGATTGACAAAATCAGAGTCATTTCCTTTAACCTCATCATCTCAAATGAGAAGCACTACTCCTCCTAGTTCCTTGGAACACAAGAAAACCGAAGTTTGGGCCACTCCCAAAGGAGAAAGGTTGCTTGATAGTACTCAACCAATAAAACCAGTGCCTTTAGCGAGCGATCATGCTGCGGTTAGCGCCGGATTGAATCATAAAGGTTGGAACCAAATGGTACTTCATCGTTTCAGAGTTATAAAGCAGAAGATAAAACATACTCTTTTGGAGTTCAGAAAAAATGGTCACCAAAGAGATTCATGTAATGATGTTAAAGAGGCCTTGCAAAGCTTAGATGATGGTGCGGTTCGAGAGTACATAAGGAGCAAAAGCTTAAAGGAGACTAAATCTTCTGATTATTCTTCCCACAGACAGGAATCACAACGACTTGTAAGGAGGACATCTTCTTTGAACGAATCGATGGATAAATATACTCGGTTGTTTGAGAAGAGCTTCGACTCAGATGTCAAGTGGCACAGTTCAAAATCCAAAAGCTTAAGATTGACAAATGAGGATAAGATGATAAGTGACCATGCTTCTAGGTTTTCTAGAAGCAATCTTTCACTGCCTAATATTGAGGCTCTAAGCTTCATTGTACATGAGGCACTTGTTGATATGAAAGATAAAACTGCTCCAGAAGAGCCTGATAATGGTGTTGAAAGAAAACTGGTGGCACTTCCTTCAAAGAAAGATAAATCAATTGATAATGTTGAAGAGACTGAAATCACAGAAACAGATAAAGCTGGTAGTGGAGATATGAGTCCAATTCCCTTATCATTTAATGATCAGGTTGTGGACAAAATTGATGAAGCAGTTACCAGTGAAAAGGTGGAAGACACATATGAACATGAGCCAGCTAGGGGAGATGGAATTTTTCCTCAGGAAAAAGAAGAAATAGGTATGGCTATCGTCGAAACTAACAGCGATGCAGATGCAACCTACCATACACAAGGTAGAGAATTGGATATTCAAGGATCTAGCATGGATGGAGTGAAGACTGAGTCACCAAGTAAAGAAAGTATACATTCTTCGCCGAGTTCGTTACCAAATGCAAATGATAATACAGAAAACGTCACAAACAAGAGTCCTGAGTATTTTTTCCAAGACATAGACAATGATTCCAATTTCAGATATGTGAAGGCCATTCTCCAATTTTCAGGTTTCATGGAAAATGATCAGATTCTAACTAGGCACACTATAGACCGGCGATTAAAGCCTTCTTTGATCATGGAAATGGAATCCTCTGTAGAGGATAATACCAAAGCCAATGATCAACAGCTTCTTTTCAACCTAGTTGATGAGGTGCTCCTTGATATATATGATAGGTCATCGAATCACTTCCCAAGACCCTTCGCCTTCAACTACCGGCTCCATCCCGTGCCGAAAGGACAATATCTTCTTAATGAAGTATGGTCCAGTGTTAAATCATACCTGAGCTTGAGGCCAGAGCTGGATCAGACTTTAGACGACGTTGTGAGATGTGACTTGGCAAGAAGAAGTAGCTGGATGAACCTCCAGCAAGAAGAGGAGGAAGTTGCAATTGAACTAGAGGACATGATTTTGGATGATTTATTAGATGAACTCGTCTTCTCATGA 2163 0.4004 MVKELVSTEKSSFVNNQEKNNPQGCMWGLFHILDYHHWHVRKVFANKKKRHARYKRNTILHNQGEEYGSPEAEKLLVAQGGEKGERYQKHEKKEQDTEIRPKEGNYKGEYALHVEKDGKKTVQASLLNHDRDTANVYKNHGDVLGVVRVEKDLLLKFLRELDSEGKNLHQASHPEARLTKSESFPLTSSSQMRSTTPPSSLEHKKTEVWATPKGERLLDSTQPIKPVPLASDHAAVSAGLNHKGWNQMVLHRFRVIKQKIKHTLLEFRKNGHQRDSCNDVKEALQSLDDGAVREYIRSKSLKETKSSDYSSHRQESQRLVRRTSSLNESMDKYTRLFEKSFDSDVKWHSSKSKSLRLTNEDKMISDHASRFSRSNLSLPNIEALSFIVHEALVDMKDKTAPEEPDNGVERKLVALPSKKDKSIDNVEETEITETDKAGSGDMSPIPLSFNDQVVDKIDEAVTSEKVEDTYEHEPARGDGIFPQEKEEIGMAIVETNSDADATYHTQGRELDIQGSSMDGVKTESPSKESIHSSPSSLPNANDNTENVTNKSPEYFFQDIDNDSNFRYVKAILQFSGFMENDQILTRHTIDRRLKPSLIMEMESSVEDNTKANDQQLLFNLVDEVLLDIYDRSSNHFPRPFAFNYRLHPVPKGQYLLNEVWSSVKSYLSLRPELDQTLDDVVRCDLARRSSWMNLQQEEEEVAIELEDMILDDLLDELVFS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30298g00014 720 MobiDBLite consensus disorder prediction 508 549 - -
Stsc30298g00014 720 MobiDBLite consensus disorder prediction 167 205 - -
Stsc30298g00014 720 MobiDBLite consensus disorder prediction 181 202 - -
Stsc30298g00014 720 Pfam Domain of unknown function (DUF4378) 565 716 IPR025486 -
Stsc30298g00014 720 PANTHER PROTEIN TRM32 7 720 IPR044257 -
Stsc30298g00014 720 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30298g00014 Stsc-Chr30298 60345 62880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30298g00014 142 710 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 25.780 3.04e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30298g00014 - - ahf:112772681 1077