Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30295g00016 ATGGAGTCTTCTCCATTGGGAATCTCAGTAACCTCAACTGCTATAAACAGCTTCCAAATCCAGCCATTCAGTATCATTAGCCTCAAGAAACCAACATCTTTTCCATCTCATCATGTTTCACCTTCCTCTTATGAATTCCCTCCTTTCTCTCATTCCAAATCAGGATTATGCAGGGCAAGTGAAGTTGTTGATCTGTTCCCAGCATTGTGCTCTCAAGTTAGAATCCGGGAGGCAAGGATGATGGACTATTGGGAAGTGGCAGAGACTCATTGCAGCTGCTTCTTCCCTGAATATTCCTTCCCTTTAGATTTTCTGCTCAGGATTGATAGATTGTTGCTGGCTATGCTAGCAGCTATGTTAACATCCTTGTCTCGGCCGAGAGCTTGCAAACGAATCTGTTTGGTTGCTGTTATTGGTAATGGCAGTGGTACCTCAATTCATCAAACTCTTTCTTCCTTTCCAAGCATCCTCAACAAGGAATATGTGGCTGGTATATTAACACTGGACAATTTCGCAGACTATCTACCACGAAAGGGGCCGCGCCGTTGGAGAAGGACTGGAATTGCATACATATCAAATGTTGCAGTAAGAGAGAACTTCAGAGGGAAAGGAATAGCTAAGAAATTGATTGGAAAGGCAGAATCAATGGCCAGAAGTTGGGGGTGCCGTGCAGTTGCATTGCACTGTGATTTGAACAATTCTATGGCCACAAAGTTATACAAAGGGCAAGGCTATAAATGTGTCAAAGTTCCAAAAGGAGCAAAGTGGCCTCAGCCAAGGTCCTCTCCTGATATCACCTTCAATTTCATGATGAAGCTTCTCAACAACTCACCTGCTTCTCATTAA 846 0.435 MESSPLGISVTSTAINSFQIQPFSIISLKKPTSFPSHHVSPSSYEFPPFSHSKSGLCRASEVVDLFPALCSQVRIREARMMDYWEVAETHCSCFFPEYSFPLDFLLRIDRLLLAMLAAMLTSLSRPRACKRICLVAVIGNGSGTSIHQTLSSFPSILNKEYVAGILTLDNFADYLPRKGPRRWRRTGIAYISNVAVRENFRGKGIAKKLIGKAESMARSWGCRAVALHCDLNNSMATKLYKGQGYKCVKVPKGAKWPQPRSSPDITFNFMMKLLNNSPASH 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30295g00016 281 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 273 IPR016181 -
Stsc30295g00016 281 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 278 - -
Stsc30295g00016 281 Gene3D - 74 256 - -
Stsc30295g00016 281 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 73 276 IPR000182 GO:0016747
Stsc30295g00016 281 Pfam Acetyltransferase (GNAT) family 160 245 IPR000182 GO:0016747
Stsc30295g00016 281 CDD NAT_SF 181 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30295g00016 Stsc-Chr30295 84558 85742 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc30295g00016 Acetyltransf_1 1.9e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30295g00016 - - gmx:100803930 337.421