Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30295g00012 ATGGAAATAAAAATAACTAGTAAAGAAAGCATTAAGCCATCATTAGCCACTCCTGAGGAACACAGAAAGCACAAACTCTGTTTATTTGATGTGTCTCAACTCAACACCTACTTCCCATTAATCCTGTTTTTCCAAAAAGGATCCTCAGACATTTTAACACAATTGAAGAAATCACTATCCAAGGCACTAACAATTTTCTACCCTCTTGCAGGTAGAAAGAGTATTGATGAACCCTTTTCAATCAATTGCAACGATGAAGGTGCAATCTTCATAGAGTCCAAAGTAGTGAACATCACCATGGAAGAGTTCCTCAAACCACCAAAGCTTGAATTTCTTAACAAACTGCTTCCTTGTGAGCCAAACAAGACTCACCCTAATTATGAAGTGTTGCCACAATTAGTGATCCAAGCCAACACTTTCAAGTGTGGTGGAATAGCTATTGGAATGTGCAATCTCCACACACTCTTGGATGCATCTTCTTGTGCTACTTTCTTGAAGACTTGGTTCGCCATTTCTAGAGGCTCGGCGGAAGAGATATCATGCCCTGATTTCTCTTCCGCTCCCTTTCTGTTCCCGCCGATGGTGAACCCTTCCGGCCTGATGCGCTCGGGGGTGCTCAACATCGGCAGGGACATACAAATTGAAACAATGTGCACCACAAGAAGATTCTTGTTTGATTTCAAAGCCATTAATGAACTCAAATCCAAGGCTACATTAGGAAATGATGATGGAAGAATGATGAACACAAGACCTACAAGGTACCAAGCAGTGTCGTCATTCATATGCAAACACATGATCATGTCATGCATGAAAGAAGAAGAAGAAGAAGAGAAGAGTAGGCCAGTGGTAGTGCTGCATGTTGTGGACATGAGGAGAAGAATGGGAGAACCTTTCTCACAAAATTCCATTGGGAACTTGCTGTGGCCAGCATTGATGCTATGTGAGAATGTGAACAAGGACACTGAGATGGGTGAACTGGTTAAAGTCACAAAGTGTGGAATTGGGAAAGTGACAAAGGAATTGTTGGTGAGAGTTCAAAAGGATGATGGGTTTTGGTGGAGTGATGAGTGTGGTGAGTTGATGCTTGAAGAGGTGGTCCACAAAAATCCTGTATCCTTTTTGTTCACAAGTTGGGGTGATATGGGATTCAAAGACTTGGATTTTGGGTTGGGAAAACCTTTGTGGTTGGCTCAGAAAGGTGGCAATGCTGAGACAATTCCAAACACTGTAGTATTCATGGACACTAAAGATGGAATAGAGGCATGGATTTCAATGAGACCCCAACATATTGCTACATTGGAAAATGATGTGGATTTTCTCACTTTTGCTTTGCTTAATCCTACTGTTTCAATCATGAATTAA 1362 0.4148 MEIKITSKESIKPSLATPEEHRKHKLCLFDVSQLNTYFPLILFFQKGSSDILTQLKKSLSKALTIFYPLAGRKSIDEPFSINCNDEGAIFIESKVVNITMEEFLKPPKLEFLNKLLPCEPNKTHPNYEVLPQLVIQANTFKCGGIAIGMCNLHTLLDASSCATFLKTWFAISRGSAEEISCPDFSSAPFLFPPMVNPSGLMRSGVLNIGRDIQIETMCTTRRFLFDFKAINELKSKATLGNDDGRMMNTRPTRYQAVSSFICKHMIMSCMKEEEEEEKSRPVVVLHVVDMRRRMGEPFSQNSIGNLLWPALMLCENVNKDTEMGELVKVTKCGIGKVTKELLVRVQKDDGFWWSDECGELMLEEVVHKNPVSFLFTSWGDMGFKDLDFGLGKPLWLAQKGGNAETIPNTVVFMDTKDGIEAWISMRPQHIATLENDVDFLTFALLNPTVSIMN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30295g00012 453 PANTHER F21J9.9 4 443 - -
Stsc30295g00012 453 Gene3D - 1 198 IPR023213 -
Stsc30295g00012 453 Gene3D - 216 442 IPR023213 -
Stsc30295g00012 453 Pfam Transferase family 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30295g00012 Stsc-Chr30295 58384 59745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30295g00012 1 434 Monolignol Biosynthesis Gene Families AT5G48930 24.622 1.75e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30295g00012 - - gmx:102667966 570.852