Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30294g00023 ATGGCTGAAATAGCTCGTGGCGCACATCAACCTTCCATTCTACCTGTCTGGGCCAGGGACTTCTTAAGCGCAAGGGATCCACCTCGCATTACATGCAACCATCGCGAATACGAAGAAGCCATAGACACCGACACCACCACCACCACCTCCATGAAGAGCAAGAAAGACATGGTTCAACGCTCCTTCTTCTTTGGACCAACCGAAGTGGCTTCCCTTCGTCGTTTGATTCCACGTCACCTTGGCCACTGCACTCGATTTGAGCTTATAACTGCATGTATATGGTGTTGCCGTACAAAAGCATTGCAACTTGCACCAGAAGATGAAGTTCGCATGATGTGCATGGTGAACGCACGTGATAGGTTTAACAACCCTAAGATTCCAATTGGTTACTACGGAAACGTTATTGCTTATCCAGCGGCAGTTACAACTGTAGAGAAGCTTTCTGAAAATCCGTTTGGATATTCTGTTGAGTTGATAAAGAAAGCGAAAGCTGAAGTAACTGAAGAGTACGTTCGTTCTGTGGCAGATCTAATGGTCACAAAAGGACGACCGTTATTTACAACCGTTGGATCTTGCATCGTGTCAAACTTGACGCGTGCTGGACGTGACCGATATACATACATCTCAAGTGTTGGACTGAAAGAGAAGAGACATTATTTCACCATAAATTTGTGTTCCGCTCACGCACAAATCGATGAGGATTAG 705 0.4567 MAEIARGAHQPSILPVWARDFLSARDPPRITCNHREYEEAIDTDTTTTTSMKSKKDMVQRSFFFGPTEVASLRRLIPRHLGHCTRFELITACIWCCRTKALQLAPEDEVRMMCMVNARDRFNNPKIPIGYYGNVIAYPAAVTTVEKLSENPFGYSVELIKKAKAEVTEEYVRSVADLMVTKGRPLFTTVGSCIVSNLTRAGRDRYTYISSVGLKEKRHYFTINLCSAHAQIDED 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30294g00023 234 Pfam Transferase family 2 188 - -
Stsc30294g00023 234 Gene3D - 38 206 IPR023213 -
Stsc30294g00023 234 Gene3D - 1 37 IPR023213 -
Stsc30294g00023 234 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30294g00023 Stsc-Chr30294 125357 127681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30294g00023 2 178 Monolignol Biosynthesis Gene Families AT5G48930 24.444 3.34e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30294g00023 K19861 - var:108341556 261.536