Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30294g00022 ATGACTTCATTATCATCGTTTCCCTCTCTACTCTTTACAGTCCAAAGGCGCCAACCGGAGCTAGTGGCTCCGGCTACACCCACTCCGCACGAAGTTAAACCATTATCTGACATAGATGATCAAGAAGGGCTCCGTTTCCATATTCCAATGTTTCATGTTTATCAGCACAAGGCGTCTATGGAAGGAAAAGATCCAGTTAAGGTTATAAGAGATGCACTCTCAAGAACACTTGTGTTTTATTATCCATTTGCAGGCAGGATAAGAGAGCGTCATGGCCGCAAGTTGGTGGTGGATTGCACCGGGGAGGGTGCCTTGTTTATTGAAGCAGATGCTGACGTAACACTTGATCAACTTCGTGGCTCTCTTCAACCTCCATTCCCGTGTTCCCAAGAACTCCTTTATAATGTTCCAGGCTCTGATGGAATTATCAACTGCCCCCTTCTACTCATACAGGTGACACGCTTTGAGTGCGGTGGTTTCATTTTTGCCATCCGCGTGAACCACACGATGGTGGATGGATCTGGTGTAAAACAATTTGTGACTGCTTTAACCGATATGGCTCAAGGTGCTCATCAACCCTCCATTTTACCTATATGGCAAAGAGAGCTCCTATTTGCAAGAAACCCGCCACAAATCACATGCAACCACCGCGAATATGATCAACAACTACCAATAAATACCAAAGACGGGACCATCATTTCTTCGTACGAGAACGATATGACTCAACGCTCCTTCTTCTTTGGACCAACCGAGATAGCTTCCCTTCGTCGTCTGGTTCCATCTCACCATGGCCACTGCACTCGTTTTGAACTTATAACTGCATGTATATGGTGTTGCCGTACCAAAGCATTGCAACTTGCACCCGAAGATGAAGTTCGCATGATGTGCATCGTGAATGCACGTGATAGGTTTAACCCTAAGATTCCAATTGGTTACTACGGAAACGTTATTGCTTATCCCGCGGCAGTTACAGCTGTAAAGAAGCTCTGTGAAAATCCGTTTGGTTATGCCGTTGAGTTGATAAAGAAAGTAAAAGCTGAGGTGACTGAAGAGTACGTGCGTTCTGTTGCAGATCTAATGGTCACGAAAGGACGACCGTTATTTACAACCGTTGGATCTTTCATTGTGTCAAACTTGACACGTTTTGGGTTTAGAGAATTGGATTTTGGATGGGGTAATGCACTGTATGCTGGAGTGGCTAAAGGTGGAGTTGGGTCGGGCTTTCATGGAGTAACATTTTTAATGGATCATCAGAATGAGAATGGAGAAGAAGGTGTGTTGTTTCCAATTTACTTGCCTTCCAACGCTATGGAGAGATTTGAGAAAGAGTTGGGGGATATGATTGGTGGGGAGTGGGGACCTTAA 1365 0.4498 MTSLSSFPSLLFTVQRRQPELVAPATPTPHEVKPLSDIDDQEGLRFHIPMFHVYQHKASMEGKDPVKVIRDALSRTLVFYYPFAGRIRERHGRKLVVDCTGEGALFIEADADVTLDQLRGSLQPPFPCSQELLYNVPGSDGIINCPLLLIQVTRFECGGFIFAIRVNHTMVDGSGVKQFVTALTDMAQGAHQPSILPIWQRELLFARNPPQITCNHREYDQQLPINTKDGTIISSYENDMTQRSFFFGPTEIASLRRLVPSHHGHCTRFELITACIWCCRTKALQLAPEDEVRMMCIVNARDRFNPKIPIGYYGNVIAYPAAVTAVKKLCENPFGYAVELIKKVKAEVTEEYVRSVADLMVTKGRPLFTTVGSFIVSNLTRFGFRELDFGWGNALYAGVAKGGVGSGFHGVTFLMDHQNENGEEGVLFPIYLPSNAMERFEKELGDMIGGEWGP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30294g00022 454 Gene3D - 229 444 IPR023213 -
Stsc30294g00022 454 Gene3D - 13 221 IPR023213 -
Stsc30294g00022 454 Pfam Transferase family 14 444 - -
Stsc30294g00022 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30294g00022 Stsc-Chr30294 121594 123628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30294g00022 14 444 Monolignol Biosynthesis Gene Families AT5G48930 29.091 1.23e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30294g00022 K19861 - gmx:100787907 614.764