Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30294g00019 ATGTCGTTGAATTTGGATCTCTCAAAAGTTTCTCTACGGCCATTCAAGCTAACTGATGTTGACGACTTTCTGCTATGGGCCGGGGATGATCGAGTCACACAAAATTTAAGATGGAAGACTTGTGGTTCAATGGAAGAGGCTTTGGCCTTCATAAGAGACGTGTGCATACCTCATCCATGGCGACGCTCAATCTGCCTCCACGACCGTTCCATAGGCTTTGTTTCGGTGTATCCATGGTCAGGTGATGATAGATGCAAGGCTGACATAGGCTATGCCGTGGCCGCAGATTACTGGGGCCATGGCGTAGCCACCAAAGCAGTGAAGATGGCTGTGCCTCAAGTGTTTAAGGACTTGCCTCATCTGATGAGGTTGCAGGCTTTCACTTCCCCGGAGAACAAGGCTTCTCAGAGAGTACTGGAAAAGGCTGGGTTCCTTAAGGAGGGTGTGCTCAGAAAGTATACTTACATTAAAGGGAACATTAAGGATTCGGTAGTGTTTAGTTTCTTGTCAACTGATGAATTTCCTCATGATGACTAG 537 0.4711 MSLNLDLSKVSLRPFKLTDVDDFLLWAGDDRVTQNLRWKTCGSMEEALAFIRDVCIPHPWRRSICLHDRSIGFVSVYPWSGDDRCKADIGYAVAADYWGHGVATKAVKMAVPQVFKDLPHLMRLQAFTSPENKASQRVLEKAGFLKEGVLRKYTYIKGNIKDSVVFSFLSTDEFPHDD 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30294g00019 178 Pfam Acetyltransferase (GNAT) domain 11 144 IPR000182 GO:0016747
Stsc30294g00019 178 Gene3D - 3 176 - -
Stsc30294g00019 178 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 169 IPR016181 -
Stsc30294g00019 178 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 161 IPR000182 GO:0016747
Stsc30294g00019 178 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30294g00019 Stsc-Chr30294 106447 107296 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc30294g00019 Acetyltransf_3 1.1e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30294g00019 - - gmx:100527210 294.664