Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30294g00017 ATGGCTCGAGGTGCTCATCAACCATCGGTTCTACCAATATGGCAAAGGGATCTTCTGAGTGCAAGAAACCCACCGCGCATCACATACAACCATCCTGAATTTGACAAAGATAAAGACATCGTGGAATGGCAGACCATAATTGGCAGCATTGAAAACATGATTGAACGATTTTTCTTCTTTGGACCCACTGAAATAGCTTCTCTTCGTTGCTTAATTCTAAATAATAATCATCAATTGGGTGAAGAATATACAAGATTTGAGCTTATCACTGCATGTCTCTGGTATTGTCTTGCAAAAGCATTGCAACTACCACCAGAGAAAGAAGTTCGCATGTGTTGCGTGGTCAATGGACGTGAGAGATTCAACCCTCCAATGCCAATTGGTTATTATGGAAATGTTATATCATTTCCGGCGGCAGTTACTATTGTAAAGAAGTTCTGTGAAGATCCATTTGAATGTGTTGTGACACGTATTGGGTTTAGAAAAGTGGATTTTGGGTGGGGCAATGCAGTGTATGGTGGGGTAACAGGGGCCAACAATAGTTTCGGGGAAATGATTCTCATGGATTATGAGAATTCAAATGGAGAAGAAGGTGTTTTAATTCCAATTTACTTGCCTGCCGATGCAATGAAGAGGTTTGCAAAAGAACTGGATGATATGCTTCGGAACCCAAATCAAACTCTCAAGAGTGGTAATAAATACCAACTCAAGTCTACCCTCTAA 723 0.4066 MARGAHQPSVLPIWQRDLLSARNPPRITYNHPEFDKDKDIVEWQTIIGSIENMIERFFFFGPTEIASLRCLILNNNHQLGEEYTRFELITACLWYCLAKALQLPPEKEVRMCCVVNGRERFNPPMPIGYYGNVISFPAAVTIVKKFCEDPFECVVTRIGFRKVDFGWGNAVYGGVTGANNSFGEMILMDYENSNGEEGVLIPIYLPADAMKRFAKELDDMLRNPNQTLKSGNKYQLKSTL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30294g00017 240 Gene3D - 157 223 IPR023213 -
Stsc30294g00017 240 Gene3D - 44 156 IPR023213 -
Stsc30294g00017 240 Pfam Transferase family 2 157 - -
Stsc30294g00017 240 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30294g00017 Stsc-Chr30294 100516 101362 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30294g00017 1 150 Monolignol Biosynthesis Gene Families AT5G48930 25.166 2.62e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30294g00017 K19861 - var:108341556 226.098