Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30294g00016 ATGTCGAATTTGGATCTCTCAAAAGTTTCTCTAAGGCCATTCAAGCTAACTGATGTAGACGACTTTTTGCTATGGGCCGGGGATGATCAAGTCACACAAAATTTAAGATGGAAGACTTGTGGTTCAAGGGAAGAGGCTTTGGCCTTCATAAGAGACGTGTGCATACCTCATCCATGGCGACGCTCAATCTGCCTCCACGACCGTTCCATAGGCTTTGTTTCGTACTGGGGCCACGGCGTAGCCACCAAAGCAGTGAAGATGGCTGTGGCTCAAGTGTTTAAGGACTTGCCTCATCTGATGAGGTTGCAGGCTTTCACTTCCCCAGAGAACAAGGCTTCTCAGAGAGTACTGGAAAAGGCTGGGTTCCTTAAGGAGGGTGTGCTCAGAAAGTATACTTACATTAAAGGGAACATTAAGGATTCGGTAGTGTTTAGTTTCTTGTCAACTGATGAATTTCCTCATGATGACTAG 471 0.4607 MSNLDLSKVSLRPFKLTDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLHDRSIGFVSYWGHGVATKAVKMAVAQVFKDLPHLMRLQAFTSPENKASQRVLEKAGFLKEGVLRKYTYIKGNIKDSVVFSFLSTDEFPHDD 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30294g00016 156 Gene3D - 72 151 - -
Stsc30294g00016 156 Pfam Acetyltransferase (GNAT) domain 74 122 IPR000182 GO:0016747
Stsc30294g00016 156 Gene3D - 2 71 - -
Stsc30294g00016 156 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 147 IPR016181 -
Stsc30294g00016 156 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 74 150 - -
Stsc30294g00016 156 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 139 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30294g00016 Stsc-Chr30294 97926 98492 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc30294g00016 Acetyltransf_3 4.2e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30294g00016 - - gmx:100527210 246.514