Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30294g00007 ATGGCGGTTGATCATATAACTTATTTGCTTTCGAAACTGCAAGCATTATCGACTTCAGATCATAGCTCCGTGGTGTCCATGAACATATTTGTGGCACTGCTGTGTGCTTGCATTGTCCTTGGACATCTTCTTGAGGAGAATCGCTGGATGAATGAGTCCATCACTGCCCTTGTCATAGGAATATGCACTGGCGTACTTATTTTGATGCTTAGCGGTGGTAGAAACTCGCATATTCTTGTTTTCAGCGAAGATCTTTTCTTCATATACCTTCTGCCACCTATCATATTTAATGCCGGCATTGTTTCAGGTGTTGCAAAAACTTTCAAGAGCATCGGAATTCATTCTCTGGAAATCGCGGATTATCTAGCAATTGGTGCAATATTTTCTGCTACAGATTCTGTCTGCACCCTACAGATCCTAAATCAGGATGAAACACCTTTATTGTACAGTCTTGTATTTGGAGAGGGAGTTGTAAATGATGCTACTTCAGTGGTGCTTTTTAATGCAATCCAAAGCTTTGACATCAACCAAATTAATCCATCAATAGGATTGCAGTTCGTTGGCAACTTCTTGTATCTATTTACCACAAGCACTCTTCTTGGGGTTTTGACTGGTCTACTTAGTGCTTACATTGTTAAGAAGCTTTACATTGGCAGGCACTCAACAGATCGTGAGTTTGCTCTGATGATGCTAATGGCATACCTTTCCTACATGATGGCTGAAGTAAGTTTCAAAGATATTTTTGTACATGCTTTTGCTACCTTGTCATTTGTTGCCGAGACCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAGGTTTGCCAGTGACAGGCCTGGAACTTCCGTTGCTGTGAGTTCAGTATTGTTGGGTTTAGTACTTGCTGGAAGAGCAGCATTTGTTTTCCCCTTATCATTCATATCCAACATCACTAGGAAATCATCAAAAGAGGGCATAAGCTTCAGGCAGCAGGTGATTATTTGGTGGGCTGGTCTTATGAGAGGAGCTGTTTCAATGGCACTTGCTTATAATCAGTTCACCTTGTTAGGGCATACTGCAAAGCGAGCGAATGCAATTATGATCACCAGCACCATCACTGTTGTGCTATTCAGTACTGTGGTGTTCGGTTTGATGACAAAACCGTTAATAAGGTTTTTGCTCCCTGTGCCGACCGGCAATACGCCGAAAAGAAAAAGCAGCGTTGCAAACTTTGCAGATTCAGCTTCTCCAAAAGCGATCACAGTACCATTCCTTTCGAGTGGCCAAGATTCTGAAGCAAACCTTGAACCCCAAGAAAGTTCTTATGGTCCAACACCAAGGAGCATCCGTGACTTACTATCCACTCCCACACACTCTGTTCATCGTTTATGGCGCAAATTCGATAACTCATTTATGCGCCCAGTTTTTGGTGGCAGAGGCTTTGTTCCATCTGACCGTGGTCCACCAACCGAACGCAGCACCCAAAATCAGTGGCATTGA 1494 0.4277 MAVDHITYLLSKLQALSTSDHSSVVSMNIFVALLCACIVLGHLLEENRWMNESITALVIGICTGVLILMLSGGRNSHILVFSEDLFFIYLLPPIIFNAGIVSGVAKTFKSIGIHSLEIADYLAIGAIFSATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDINQINPSIGLQFVGNFLYLFTTSTLLGVLTGLLSAYIVKKLYIGRHSTDREFALMMLMAYLSYMMAEVSFKDIFVHAFATLSFVAETFIFLYVGMDALDIDKWRFASDRPGTSVAVSSVLLGLVLAGRAAFVFPLSFISNITRKSSKEGISFRQQVIIWWAGLMRGAVSMALAYNQFTLLGHTAKRANAIMITSTITVVLFSTVVFGLMTKPLIRFLLPVPTGNTPKRKSSVANFADSASPKAITVPFLSSGQDSEANLEPQESSYGPTPRSIRDLLSTPTHSVHRLWRKFDNSFMRPVFGGRGFVPSDRGPPTERSTQNQWH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30294g00007 497 MobiDBLite consensus disorder prediction 476 497 - -
Stsc30294g00007 497 MobiDBLite consensus disorder prediction 426 447 - -
Stsc30294g00007 497 PANTHER SODIUM/HYDROGEN EXCHANGER 17 475 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Stsc30294g00007 497 Gene3D - 117 169 - -
Stsc30294g00007 497 Pfam Sodium/hydrogen exchanger family 34 242 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc30294g00007 497 Pfam Sodium/hydrogen exchanger family 249 388 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30294g00007 Stsc-Chr30294 28034 32517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30294g00007 9 494 Antiporters AT3G05030 62.107 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30294g00007 - - aip:107645855 835.099