Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30293g00015 ATGTGGCCGGCGAGTACGGTGGTCGATCTCCGGGAGATAGCAACGCGCATGGGGAGGTGGGGTTTGGAAATGCGTGCGCGCGTTATGGAATTGGAAAACCTGATTCGCCACGATTCAGCAAAGGCGGCTATTCCCGGTGGTGGGCTTCACTGTATCACTAAATACGTGGTGAATTACTTTATTGCCGCATCCCAGTGGCGGCGAACCTTGGAACTAGTTTCCGAAGGACTTCCATTGAAGGATTTCATCACTATGGTTCATGATAATAGGCATCAATCTAATACTCATTTTTGTGCTCAATTGTGTTGGATAATGGACTTATTAGAGAGCAATTTGGAAGCCAAGTCCAAATTCTACAAGGACCCTGAATTGTGCTCTGTTTTCATGATGAATAATTTGAGGTACATTGTTCAGAAGGCGAAAAACAGCGAATTGGGTCCCATTTTGGGTGATGATTGGATCCGTAAGATATGGCTATGA 480 0.4562 MWPASTVVDLREIATRMGRWGLEMRARVMELENLIRHDSAKAAIPGGGLHCITKYVVNYFIAASQWRRTLELVSEGLPLKDFITMVHDNRHQSNTHFCAQLCWIMDLLESNLEAKSKFYKDPELCSVFMMNNLRYIVQKAKNSELGPILGDDWIRKIWL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30293g00015 159 SUPERFAMILY Cullin repeat-like 19 157 IPR016159 -
Stsc30293g00015 159 PANTHER EXOCYST COMPLEX PROTEIN EXO70 18 157 IPR004140 GO:0000145|GO:0006887
Stsc30293g00015 159 Gene3D Exocyst complex component Exo70 3 158 - -
Stsc30293g00015 159 Pfam Exo70 exocyst complex subunit 25 157 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30293g00015 Stsc-Chr30293 93927 94786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30293g00015 19 156 EXO70 exocyst subunit family AT5G58430 58.865 1.34e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30293g00015 K07195 - ahf:112719926 215.312