Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30292g00012 ATGAACAACAACCACCACCACCACTTGCAACAACCAAATTTAGGAGATGCAACGGCCTTTGAAGAGATTCTTGCCCGTGCTGAAATGATCAATCATAATAGCAGTAATAATGATTACAATATTGCAAACCAAGACAATGTTCTTGTAGACACTAAGCCTTTGATCGGTGTTGCTGATCCCATGGTCATGGCTTCTCATCATCAACCTAATTGGCTGCAAATGCAATTTCCTTCCATGCAACAACATCACCATCAAGAGAACTTGTTGTGTCAAGATATTTTCGATTCAAAGCCAGTTGTTGAGAATCCAATGATGGAAACTGACTACTCTAATTCATCGCTTGGGATTTCGATGCCGGTGGCTGCCACGACATCATCCACATGTTCAGATTCAAAGGAAGTTGCTGGTGCTGGTGGCGGCCCCGGCCGCCGAGGCCAGAAGAGAGGGTTCTCGAATGAGTTGCAAGAACAGAACATTGACAGGAGGCAGAAGAGAATGGCAAAGAACCGAGAATCTGCTGCTAAGTCAAGAGCAAAGAAGCAGGCCTATATAGAAAAGTTAGAGAATGACAAGTCTCGGTTGCTGAAATCAAACAGATGGCTCAAGAAGGTGATGGAATTTGAGGAAAGATTATTTTCAGATACAACTCTCACTCCAAGATATCAACTCAGGCGTACAAGCTCAAATACATTCTAG 696 0.4339 MNNNHHHHLQQPNLGDATAFEEILARAEMINHNSSNNDYNIANQDNVLVDTKPLIGVADPMVMASHHQPNWLQMQFPSMQQHHHQENLLCQDIFDSKPVVENPMMETDYSNSSLGISMPVAATTSSTCSDSKEVAGAGGGPGRRGQKRGFSNELQEQNIDRRQKRMAKNRESAAKSRAKKQAYIEKLENDKSRLLKSNRWLKKVMEFEERLFSDTTLTPRYQLRRTSSNTF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30292g00012 231 Gene3D - 160 212 - -
Stsc30292g00012 231 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 164 179 IPR004827 GO:0003700|GO:0006355
Stsc30292g00012 231 MobiDBLite consensus disorder prediction 154 179 - -
Stsc30292g00012 231 CDD bZIP_plant_BZIP46 161 206 - -
Stsc30292g00012 231 SMART brlzneu 157 213 IPR004827 GO:0003700|GO:0006355
Stsc30292g00012 231 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 159 203 IPR004827 GO:0003700|GO:0006355
Stsc30292g00012 231 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 5 228 IPR043452 GO:0003700|GO:0045893
Stsc30292g00012 231 MobiDBLite consensus disorder prediction 127 179 - -
Stsc30292g00012 231 SUPERFAMILY Leucine zipper domain 161 208 IPR046347 GO:0003700|GO:0006355
Stsc30292g00012 231 Pfam bZIP transcription factor 160 204 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30292g00012 Stsc-Chr30292 116092 119690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30292g00012 5 231 bZIP Transcription Factor Family AT3G56850 34.632 1.73e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc30292g00012 bZIP_1 3.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30292g00012 K14432 - qsa:O6P43_019692 147.517