Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30291g00012 ATGGAATCAAAAGGATCTCAGAGATGTCTTGCGGGAAAACAAGAGAACCTTGAAGCTATAGTTCAGCCATATCGTGAAATTGGGGAAGAGTTACCTGTTGAAGGTTTATCAAAAATGAGTCGGCTGAAACTACTCAGACTTGGCAAAGTGAATTTCTCAGGAAGCCTGCATTTTCTTTCTAATGAGTTGGGATATCTTGAATGGTATGGATATCCTTTCACATGTTTGCCATCAAGCTTTCAGCCATATAAACTCGTTAAATTAATCCTACATCATAGCAACATCAAAGAACTCTGGGAGGGAATCAAGCTTAGCTGTTGA 321 0.3925 MESKGSQRCLAGKQENLEAIVQPYREIGEELPVEGLSKMSRLKLLRLGKVNFSGSLHFLSNELGYLEWYGYPFTCLPSSFQPYKLVKLILHHSNIKELWEGIKLSC 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30291g00012 106 Pfam Leucine Rich Repeat 84 103 IPR011713 -
Stsc30291g00012 106 Gene3D Ribonuclease Inhibitor 11 106 IPR032675 -
Stsc30291g00012 106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 98 IPR044974 GO:0006952
Stsc30291g00012 106 SUPERFAMILY L domain-like 30 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30291g00012 Stsc-Chr30291 52641 53992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30291g00012 38 103 WRKY Transcription Factor Family AT4G12020 40.541 4.10e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30291g00012 - - ahf:112732546 121.324