Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30289g00002 ATGGCTGGAAAATCAAACATAGACAACATCGATGAACAAGTAATTGCTGGCTTCAAGGAACTCAATCACAAGTGTCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTGAAACCAATGTGTATCCAAGAGAGCATGAATGCTTGAAGGAACTCCGCGAGATTACAGAGAAACATCCTTTCAACCTCATGGCTACACCAGCGGACGAAGGACAACTTATAAACATGCTGATTAAGCTCATAAATGCAAAGAACACCATGGAAATTGGTGTCTACACCGGCTATTCTCTACTCTCTACTGCTCTTGCTCTTCCTCATGATGGAAAGATCTTGGCCATGGACGTGAACCGACAATATTATGAGATAGGATTGCCCATAATTGAAAAAGCTGGCGTAGCTCATAAGATTGACTTTAGAGAAGGACCTGCTCTTCCTTTACTTGATGAATTGATTAAAGATGAGAGTAACAAGGGTGCATTTGATTTTGTTTTCATTGATGCGGATAAAGACAACTACTTGAACTACCATAAGAGGGTGATTGAGCTTGTTAAGGTTGGGGGTCTGATCGGATACGACAACACCCTATGGTTTGGATCTGTGGCTTACTCTGAAGACACACCGATGCTTGATTTTGTGAAGTATTTCCGCACTCATGTGCTGGAGATAAACAAGTATCTCGCTAATGATCCAAGGGTTGAGATTTGTCAGCTTCCTGTTGGTGATGGCATTACCTTGTGCCGCCGCATCAACTGA 753 0.4236 MAGKSNIDNIDEQVIAGFKELNHKCLLQSDALYQYILETNVYPREHECLKELREITEKHPFNLMATPADEGQLINMLIKLINAKNTMEIGVYTGYSLLSTALALPHDGKILAMDVNRQYYEIGLPIIEKAGVAHKIDFREGPALPLLDELIKDESNKGAFDFVFIDADKDNYLNYHKRVIELVKVGGLIGYDNTLWFGSVAYSEDTPMLDFVKYFRTHVLEINKYLANDPRVEICQLPVGDGITLCRRIN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30289g00002 250 PANTHER O-METHYLTRANSFERASE-RELATED 22 249 - -
Stsc30289g00002 250 FunFam Caffeoyl-CoA O-methyltransferase 1 18 250 - -
Stsc30289g00002 250 Gene3D Vaccinia Virus protein VP39 14 250 IPR029063 -
Stsc30289g00002 250 Pfam O-methyltransferase 39 249 IPR002935 GO:0008171
Stsc30289g00002 250 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 25 249 IPR002935 GO:0008171
Stsc30289g00002 250 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 248 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30289g00002 Stsc-Chr30289 12732 16828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30289g00002 19 250 Monolignol Biosynthesis Gene Families AT4G34050 75.000 1.75e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30289g00002 K00588 - gmx:100795858 405.986