Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30288g00015 ATGGAGAATAATAGCAGTAATGAGGTTTCGAAGGCAATAATAATGGAGCAAGAACTCATGAGAGGGCGTGACGTGGCAAACCACTTACTTGAAGTGGTTGTTGATAATAATAATAATAATAAATCAAATGGTAGCAGCATAAATGAAGAAGAAATTATTGAAAGGTCAATGGTGATGTCTTTTGCTGAAGATGGTGTGCGCAAGGTTCTGAGATCATTCACAAACACCCTCTTGCTTTTGAACAGCGACACCCAACATAACTCTTTTTCTATTCAACATCATCATCATCAAAGCTGCAACAGCAACAAGAAGAAGAAGAATAGTTTCAGCAATAAAAGTCAAAGAGGGTGCCACAAGAGAAAATCAGTTGCACCAACCTGGCAGAGTGACAGCTCAATTCTGTGTGAGGATGGTCATGCATGGAGAAAATACGGACAGAAGAAGACCGTCAATTCCAACTACCTCAGGAGCTACTACAAATGCAGTTACAAGAAGGAGCAAGATTGCAAAGCCATCAAACATGTTCAAAGAATCCAAGAAGATCCTCCATTGTACCGTACAAGCTATTATGGACATCACACTTGCAAAAGCTACTCTCTCATCAATAATAATTACCCTTACACAAAACTAGAACCCGCTTCTTCTTTTGAATCTTCTACGCTACTATGCTTCACTAGTACTAGTAGTGCTGATCACAATACCAATAATACCCTTCCAATAATAACCAAACAAGAACCACAGCCTTTTCCTCCATCCTCATTTTCTTCTTCATCAACAAAACAAGAGCCAATGGAAGTGGTTTCTAATGACCATATTGACCACAAGAAATCTTCCTTGTCAAATAATGACTACGATCTCATAAGTGATTATGAACTTTATTTCAATTATTAG 891 0.3816 MENNSSNEVSKAIIMEQELMRGRDVANHLLEVVVDNNNNNKSNGSSINEEEIIERSMVMSFAEDGVRKVLRSFTNTLLLLNSDTQHNSFSIQHHHHQSCNSNKKKKNSFSNKSQRGCHKRKSVAPTWQSDSSILCEDGHAWRKYGQKKTVNSNYLRSYYKCSYKKEQDCKAIKHVQRIQEDPPLYRTSYYGHHTCKSYSLINNNYPYTKLEPASSFESSTLLCFTSTSSADHNTNNTLPIITKQEPQPFPPSSFSSSSTKQEPMEVVSNDHIDHKKSSLSNNDYDLISDYELYFNY 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30288g00015 296 MobiDBLite consensus disorder prediction 91 123 - -
Stsc30288g00015 296 Gene3D WRKY domain 120 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc30288g00015 296 ProSiteProfiles WRKY domain profile. 130 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc30288g00015 296 MobiDBLite consensus disorder prediction 241 265 - -
Stsc30288g00015 296 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc30288g00015 296 Pfam WRKY DNA -binding domain 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc30288g00015 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 228 IPR044810 GO:0003700
Stsc30288g00015 296 SUPERFAMILY WRKY DNA-binding domain 132 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc30288g00015 296 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30288g00015 Stsc-Chr30288 120834 123643 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30288g00015 6 195 WRKY Transcription Factor Family AT3G56400 30.846 2.69e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc30288g00015 WRKY 4.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30288g00015 - - adu:110273813 311.227