Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30288g00011 ATGACTTCAGGGACTCGGCTTCCGACATGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGGAGAAGAGCCATAGCAGCAAAGATCTTCGCTGGTCTAAGAATGTACGGTAACTTCAAGCTTCCAAAGCACTGTGACAACAATGAAGTCCTCAAAGCTCTCTGCAATGAAGCTGGCTGGACCGTTGAACCAGATGGCACCACTTACCGCAAGGGATGCAAGCCTTTGGAGCGCATGGATATAATGGGTGGTTCCTCAGCTGCAGCAAGCCCTTGTTCGTCTTACCACCCAAGTCCGTGTGCTTCCTACAACCCGAGCCCTGGCTCGTCGTCCTTCCCAAGCCCATCAAGATCCCCCTATGCATCGAATAATCCCAACAGCGACGGCAATTCCCTCATTCCATGGCTTAAGAACCTCTCCACTGCCTCCTCCTCTGCTTCATCCCCTAAGCTCCCTCACCTCTACCTTCAAAATGGCTCCATCAGCGCGCCTGTCACGCCGCCCTTGAGCTCTCCAACTGCTAGGACACCAAGGATGAATGTTGATTGGGGCGATCAGTCTGGACGGCCAGGATCAGGGTGGACTGGAGGACAGCACTACTCATTCCTGCCATCCTCTAGTCCTCCTAGCCCTAGCCGCCAGGTGGTCGACCCTGAATGGTTTGCAGGCATCAAGCTCCCCCATGTTAGCCCAACTTCCCCTACATTCACCCTTATGTCCTCAAACCCCTTTGCCTTCAAGGAAGAGGGTTTGGCTCGAACCAGCTCTCGCATGTGGACTCCTGGACAGAGTGGGACGTGCTCTCCTGCCTTGCCGGCTGGTTCTGATCACACTGCTGATATTCCGATGTCCGAGGCTGTTTCGGATGAATTCGCATTTGGGGGTAACGCATCCGGCCTTGTGAAGCCATGGGAAGGAGAAAGGATACATGAAGAATTTGGAGCAGATGATCTTGAACTCACACTTGGTACCTCAAAGACAAGGTGA 990 0.5343 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIMGGSSAAASPCSSYHPSPCASYNPSPGSSSFPSPSRSPYASNNPNSDGNSLIPWLKNLSTASSSASSPKLPHLYLQNGSISAPVTPPLSSPTARTPRMNVDWGDQSGRPGSGWTGGQHYSFLPSSSPPSPSRQVVDPEWFAGIKLPHVSPTSPTFTLMSSNPFAFKEEGLARTSSRMWTPGQSGTCSPALPAGSDHTADIPMSEAVSDEFAFGGNASGLVKPWEGERIHEEFGADDLELTLGTSKTR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30288g00011 329 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 141 IPR008540 -
Stsc30288g00011 329 MobiDBLite consensus disorder prediction 1 20 - -
Stsc30288g00011 329 MobiDBLite consensus disorder prediction 162 215 - -
Stsc30288g00011 329 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 329 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc30288g00011 329 MobiDBLite consensus disorder prediction 162 178 - -
Stsc30288g00011 329 MobiDBLite consensus disorder prediction 192 214 - -
Stsc30288g00011 329 MobiDBLite consensus disorder prediction 100 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30288g00011 Stsc-Chr30288 90641 94609 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30288g00011 1 329 BZR Transcription Factor Family AT1G78700 69.322 1.62e-137 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc30288g00011 BES1_N 5.8e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30288g00011 - - gmx:100795369 518.079