Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30287g00016 ATGAACGACAAGAGGAATCAAAAGCGTCCAAGATCACTGTATTCCAAAATGCCTATGACAGACTCCAATGATGTGCAGAGTTTCGATAATAGCATCGTTTTCCCTGTCGAAGACATTGTACAATATCCCTTGCCTGGCTATGTATCCCCATTTTCAATAAGTTTCAGTCCCGACGATAGTTTGGTGTCTTATTTATTTAGCCCTGATCACACATTAAATAGAAAGATTTTCTCATATGATCTGAAGACCAACAAGCAAGAATTGTTATTTAGCCCTCCTGACGGTGGACTTGATGAGAGTAATATTTCAGCGGAAGAAAAGTTGAGGAGGGAAAGATTGAGGGAGCGCGGGTTAGGAGTGACGCGGTATGAATGGGTGAAGACAAGCTCAAAAAGAAAAGCACTCATCGTGCCATTGCCTGCTGGGATTTATCTTCATGATATTTCCAATTCAAAATCAGAGCTCAAGCTTCCAAGTACATCAGCTTCACCCATTATTGATCCACATCTGTCCCCAGATGGATCGATGCTTGCTTATGTAAGAGACTGGGAGTTGCACGTGCTCAATCTCTTGACTAACGAATCAAGGCAGTTGACCCATGGTGCAGCAGGAAATGGTTTGACTCATGGGCTTGCTGAATATATAGCTCAGGAGGAGATGGATAGGAAAACAGGATATTGGTGGTCACTGGACAGTAAATATATAGCTTTTACCGAAGTTGATTCTTCCGAAATACCACTCTTTAGAATCATGCACCAAGGTAAGAGCTCGGTTGGTTTAGATGCACAGGAAGACCATCCCTATCCTTTTGCCGGGGCTTCAAATGTTAAAGTGCGCCTAGGAGTTGTTTCGGTTTTGGGAAGCTCTACCACTTGGATGGATCTTCGGTGCGGGGGTGCGGAACAGCAAAACAATGAAGAAGAATATTTGGCCAGAGTCACTTGGATGCATGGAAACATTTTGACTGCCNNNNNNNNNNAGGTTTTGAACAGGAAACACACTAAAATAAAGATCCTAAAGTTTGATATCAGAACAGGCCAGAGGAAAACTCTATTGGAGGAAGAAAACAACACTTGGATCAATATACATGACTGCTTGACACCGCTTGATAAAGGAGTTACAAAGTTCTCAGGTGGATTCATCTGGGCTAGTGAGAAAACAGGATTTAGGCATCTCTATGTTCATGATGCAAATGGGACTTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTCGAGCAAGTAGCCGGTGTGAATGAGGCTACAGGATTAATATATTTTACCGGGACCCTAGACAGTCCTCTGGAGTCCAACTTATATTGTACAAAACTTTTTGTTGATGGGAGTCAGCCACTTCAAATCCCTGTCAGGCTTACACGCAGCAAGGGGAAACACATTGTTGTCCTTGATCATCATATGCGAAGTTTTGTTGATATCCATGACTCCCTTGATTCTCCTCCTAAGGTGTTACTTTGCTCCTTAGAGGATGGAAGCATGATAAGGTCTTTGTACGAGCAGTCATTTACGATTCCAACCTTCAAAAAGCTTCAACTGGAACCACCGGAGATTGTTGAAATACAGGCCAATGATGGCACTACATTGTATGGAGCTATATACAAACCTGATGCATCAAGATTTGGACCTCCACCTTACAAAACTATGATCAGTGTTTATGGTGGTCCAAGTGTACAGCTTGTTTGTAACTCTTGGCTTAGTACAGTTGATATGAGAGCACAATATTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCAAGACGTGGGTTGAAGTTTGAAAGCCATTTCAAGAGCAAACTCGGTCAAGTCGATGCTGATGATCAGCTAACTGGTGCAGAGTGGCTTGTCAAACAAGGGCTTGCAAAAGCTGGTCACATTGGATTGTATGGTTGGAGCTATGGCGGTTACCTCTCAGCTATGTCCCTGTCGAGGTATCCTGATTTCTTCAGATGTGCTGTGGCCGGTGCCCCTGTCACATCATGGGATGGATATGATACATTCTACACGGAGAAGTACATGGGATTGCCATTTGAAAATCAATCCGGGTACGAATGCGGCACTGTGATGAACCACGTTCACAAGTTGAAAGGACGGTTGCTGCTTGTGCATGGGATGATTGATGAGAATGTGCATTTTAGGCACACTGCTAGGCTTGTTAATGCTCTTGTGGCGGCTGGAAAACCATACGAGCTAATAATTTTCCCGGACGAACGTCACATGCCACGGCGCCATAGAGACCGAGTTTATATGGAAGAGAGAATATGGGACTTCATAGAAAGGAGTCTGTAA 2322 0.4341 MNDKRNQKRPRSLYSKMPMTDSNDVQSFDNSIVFPVEDIVQYPLPGYVSPFSISFSPDDSLVSYLFSPDHTLNRKIFSYDLKTNKQELLFSPPDGGLDESNISAEEKLRRERLRERGLGVTRYEWVKTSSKRKALIVPLPAGIYLHDISNSKSELKLPSTSASPIIDPHLSPDGSMLAYVRDWELHVLNLLTNESRQLTHGAAGNGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLDAQEDHPYPFAGASNVKVRLGVVSVLGSSTTWMDLRCGGAEQQNNEEEYLARVTWMHGNILTAXXXXVLNRKHTKIKILKFDIRTGQRKTLLEEENNTWINIHDCLTPLDKGVTKFSGGFIWASEKTGFRHLYVHDANGTCLGPITEGEWMVEQVAGVNEATGLIYFTGTLDSPLESNLYCTKLFVDGSQPLQIPVRLTRSKGKHIVVLDHHMRSFVDIHDSLDSPPKVLLCSLEDGSMIRSLYEQSFTIPTFKKLQLEPPEIVEIQANDGTTLYGAIYKPDASRFGPPPYKTMISVYGGPSVQLVCNSWLSTVDMRAQYLRNQGILVWKLDNRGTARRGLKFESHFKSKLGQVDADDQLTGAEWLVKQGLAKAGHIGLYGWSYGGYLSAMSLSRYPDFFRCAVAGAPVTSWDGYDTFYTEKYMGLPFENQSGYECGTVMNHVHKLKGRLLLVHGMIDENVHFRHTARLVNALVAAGKPYELIIFPDERHMPRRHRDRVYMEERIWDFIERSL 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30287g00016 773 SUPERFAMILY DPP6 N-terminal domain-like 49 514 - -
Stsc30287g00016 773 SUPERFAMILY alpha/beta-Hydrolases 520 772 IPR029058 -
Stsc30287g00016 773 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 35 770 - -
Stsc30287g00016 773 Gene3D - 36 513 - -
Stsc30287g00016 773 MobiDBLite consensus disorder prediction 1 22 - -
Stsc30287g00016 773 Gene3D alpha/beta hydrolase 514 773 IPR029058 -
Stsc30287g00016 773 Pfam Prolyl oligopeptidase family 574 772 IPR001375 GO:0006508|GO:0008236
Stsc30287g00016 773 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 139 487 IPR002469 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30287g00016 Stsc-Chr30287 90878 95648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30287g00016 444 771 Carbohydrate Esterase AT5G36210 23.235 2.06e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30287g00016 K01278 - gmx:100812178 1368.6