Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30283g00025 ATGTCATTTTCCTTGTTTTCAACACCGCAGCAACAGCAATCGCCTTTCCAGCAGACTAGCTTGTTTCAGCAGCCGCAACAGCAGCAGCAACAGCTCCAACTTCAATTTCAGCAGCAACAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGTTGTTTCTGTTCACCAACGATAAAACTCCCGCTACTTACAGTACCAACTGGTCCGATCTACACCCTGATTCCCAGAAGTTTCTTCTTCAGATCGAGGAGCGGATATTGGAGTATCGGGATGAAAGCCAGAGGCTAGATCAATGTAGTCGTCTGTATGATTCTTCTGTTTCCAACGATGGCTTTGAGCTTGATGCTAGCCATATTGTTCAGGAGCTTGGTGGAATCAGCACTGGAATGGAAAGACAGAAAACTGTGTTGCTGGAACTGATGTCTGTTGTCAAGGATATGTTACGCAACACTGAGGTAGCTGTTCGTTCTTTTATGATGCTACGCCCAAGGTTCCTTCATCCCAGTGGGGGTGCATCAAGTGCCACTGCCCCATCACAGACTCCTGGTGCAACTGCATCATCTGGTCCAAGTAGCCAACCAACTGCTACATCTATAGTGCCTGTTTTCGATTTCTATAGTGGTCTTCCAAAGAAACCATCACCTTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGTCATCAGTGGATTGATGAATTGGAGCAACTTATTCTTTTGGACTCTGAGAGAAATGGTTCTGCTAATGGATCCTCATTGTTGCAGTCTCTTCCCAAAGTCATGACAAATGTGCATGATTTTTTTGTTCATGTTGCTGCAAAGGTGGAGAGCATACATCAGTATATTGAATCTATGAAATCAGCATACCTAGCTGATCAACGCCGACGGGGTGAGGTGAATGATCCATTTTTAGAGGCTGATCGACGAGAAACTGCAAGACAAGAAGCAGCCTCAAAAAGAGTTCATCCAACGCTGCATTTACCTGCAAATTCACAGCCCTCAACTCAAGTTGCAGGGTTGTTTTCTAGTTCAGGAACTCAAGGAGCATTGGCTGCCCCACAGACATCAGCAGCAACTACATCATCATCAGGAAGCGGACTCTCTCTTTTTAGTACACCTTCTGCTCCATCATCTTCTATGCCATCGTCTTTGTTTGCAACCCCATCAACTCCTGCCCTGGGGTCCTCTTGGTTTGGATCATCTACTGCTACACCTCAAACCTCACTTTTTGGTTCTACATCATCCTCCTTACCTGGTCCTGCTTCAACTCCTTCTTTGTTCAGTAATACTGCTCCATTGTTCAGTTCAACTCCAGCTGGAAATTCGCTGTTCTCAAGTTCATTTGTGTCAGGTGCTGCAACAGGATCCGGTGCAAGCTTTGGAGGATCTAAAAATCCACGGCCAAAATCCAGAACTGCTCGCCGGTAA 1449 0.4569 MSFSLFSTPQQQQSPFQQTSLFQQPQQQQQQLQLQFQQQQQQQQQQQQQQQQQQLFLFTNDKTPATYSTNWSDLHPDSQKFLLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASHIVQELGGISTGMERQKTVLLELMSVVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGATASSGPSSQPTATSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIDELEQLILLDSERNGSANGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALAAPQTSAATTSSSGSGLSLFSTPSAPSSSMPSSLFATPSTPALGSSWFGSSTATPQTSLFGSTSSSLPGPASTPSLFSNTAPLFSSTPAGNSLFSSSFVSGAATGSGASFGGSKNPRPKSRTARR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30283g00025 482 Gene3D - 215 305 - -
Stsc30283g00025 482 MobiDBLite consensus disorder prediction 461 482 - -
Stsc30283g00025 482 MobiDBLite consensus disorder prediction 1 22 - -
Stsc30283g00025 482 MobiDBLite consensus disorder prediction 175 198 - -
Stsc30283g00025 482 MobiDBLite consensus disorder prediction 172 198 - -
Stsc30283g00025 482 MobiDBLite consensus disorder prediction 308 380 - -
Stsc30283g00025 482 MobiDBLite consensus disorder prediction 308 327 - -
Stsc30283g00025 482 Coils Coil 27 54 - -
Stsc30283g00025 482 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 441 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Stsc30283g00025 482 MobiDBLite consensus disorder prediction 332 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30283g00025 Stsc-Chr30283 113038 118043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30283g00025 55 482 NAC Transcription Factor Family AT4G37130 64.773 2.88e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30283g00025 K14307 - gmx:100776992 646.736