Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30283g00022 ATGCCCGCTCTCAGGAAGAGAAACCGCCAATCGGAGTCGTCTTCCGCTGCCACTCTCACCAACAGTCCTGCGAGCCACGATCATCAACACCAAATGTTGGACTATGAACTCTCCAGGGAGCAAAGAATCCGTGAAAACCAAGAGAGATTGGGGAAGCTTGGTATCTTGGATCTCTCCCTCAAGCTCAAATCCTCCAACCTTCCTTCTAAGCGCACTCGATCCTACACCCCCAAATCCCCTCCTACTCTCCCCCCATCTGCTCCTGTTCGCCGTTCCTCCAGGCTGCAGAATGTGACTCCTGTTACTTACTGTGAGGCGCCTGTGAAGAAATCTAAGCTTAAGGATCATGTGAGGGTTGTGATCGAGGAGGGTGCGAAGCCTGAGGTGTATACCGAAGAACACGAGAAGCTGTTGGGTAATACTGACAAGAGTTGGACTCTTTTCGTTGATGGTGTTGGGAAAGATGGAAAACGGATTTATGATTCCGTGCAAGGGAAGACTTGTCATCAGTGCAGGCAAAAAACTCTTGGTTATCGTACCCGCTGTAGCACATGCAATTTGGTCCAGGGGCAACTTTGTGGAGATTGCTTGTATATGAGATATGGTGAGCATGTACTTGAAGCATTGCAGAATCCAAATTGGAAATGCCCAGTTTGTCGTGGAATTTGCAATTGTAGCTTATGTCGTCAAGCAAAAGGATGGGCCCCCACTGGCACCCTATATAGAAAGATATTGGCACTGGGTTACAAATCAGTTGCACATTACCTCATCCAAACCCGGCGCGCTGATAAAGATGCAGAGAAAAGTGCAGATTCCAACTCGGCTTCAGCAAAAAGGTCACTACCTTTCTCTGAGGTGGAGGTCAATGAGTCTGTTGAGGTCAAAGATATTCCTGCTGGATTAGTGAAGCCACTAGGTAATACTGAGAGCAATGGAGATGAAGTTATGACAAAGAGATCGTCGCTGAATCATGTAGTGTTCAATGAGTCTATTGAGGTCAAAGAGGCTCGTGTTGAATCAGTGAAGCCCCTAGCTGAAACCGAGAGCATACCAGCTGTGATGGAGGATCTGCTTCAATCTTGGTCAACCTCAGTAGTTTACATACTTGCTTTGCTGATCTGCATCTTCATTTATTATGTTGGAAGATCAGTAACTAGTAACAAGACCAAGACCTGTACCGCACCACAAGCAGGCGGGGCGTTGCCAATTATCGGCCATCTACACCTATTTGGTGGAAAGAAGCTGCTCTTTGAAACACTTTGTACCTTGGCAGAAAAATATGGACCAGCCTTTACCATAAAGATGGGTTCAAACAAGGTCCTAGTTTTGAGTAGTTGGGAAATGGCCAAAGAGTGTTTCAGTGAACATGATAAAGCATTCGCAGACAGACCCCTAGTTACTGCTTCAAAGCTACTAGGCTATGATGGTGCAATGTTTGGTTTTGCACCTTACAGTCCTTACTGGCGTGAGATGCGCAAGATTGTTACAATCCACGTTCTATCCAACCATAGGATTGATCTGCTTAAGCACATACGAGCTTCAGAGGTGGAGATGGCAATGAGAGAGCTGTATGGCTTGTGGTCAAGCAAAGGCTGCCCGGAGAATGGAATATCGGTCGAAATGAAGCAATGGTTTAGTGATTTGGCATTTAACATTATATTGAGAATGATATCATGCAAGAGATACTTTGGAGTAAGCTCAGAAGATGGAAAGGCACAAGATTTCCAGAAAATAATAAGGGACTTCGTGAACCTATTTGGGGTGCCTGTGTTAGCTGATTCAATCCCAGCTCTTTGGTGGTGGGATATACATGGTTACAAGAAGAAGATGAAGAAGACGGCTCAAAAACTTGACCAACTACTTGGGGAGTGGCTAGCGGAACACAAGCAGAGAAGACGGTTAGGCAAGGATGCAGAGGAAGAGCTAGATTTCATGGATGTGATGCTGAGAGTCCTAGAAGAAAACCCGATTGCTTATTTCGACACAGATACGATTATCAAGTCTACTCTCCTGAATCTGTTGGCGGGAAGTGACTCAATTATGGTAGCTATAACATGGACCTTGTGTCTGTTACTTAATAATCCACAAGTACTGAAGAAGGCTCAAGATGAGTTGGACAACAAAATTGGGAGGAATAGACAAGTGAAAGAATCTGACATCAAGGATTTGGTGTATCTTCAAGCCATTGTGAAGGAATCTTTGAGGGTAAGCTCTCCGAGTGGGGTCATTTTTCCTCGTTCGGCGATGAAGGACTGCACACTTTCAAATGGCTACCATGTACCAGCAGGCACCAAGGTGATGATAAACATATGGAAAATAATGCATGATGAGCAGTTGTGGCCTGATCCATATAGCTTTCAACCTGAGAGATTCTTGTGCAGCAGCCACAAGGACATAGATGTTAGGGGCCAACACTTTGAGCTTCTGCCATTTGGCTCCGGAAGGCGTTCATGCCCCGGAATTTCACTAGCTCTCAGTGTTATGCATCTTATTCTGGCTGCACTGCTGCATAGCTTTGAAATTACTACTCCATCCAATGAACCTGTGGACATGACAAAGGGCATTGGTTTGACAAATATGAAAGCAACCCCACTTGAGGTTCTTCTTGTTCCACGCCTCAACTGTGTTTTGTGA 2634 0.4541 MPALRKRNRQSESSSAATLTNSPASHDHQHQMLDYELSREQRIRENQERLGKLGILDLSLKLKSSNLPSKRTRSYTPKSPPTLPPSAPVRRSSRLQNVTPVTYCEAPVKKSKLKDHVRVVIEEGAKPEVYTEEHEKLLGNTDKSWTLFVDGVGKDGKRIYDSVQGKTCHQCRQKTLGYRTRCSTCNLVQGQLCGDCLYMRYGEHVLEALQNPNWKCPVCRGICNCSLCRQAKGWAPTGTLYRKILALGYKSVAHYLIQTRRADKDAEKSADSNSASAKRSLPFSEVEVNESVEVKDIPAGLVKPLGNTESNGDEVMTKRSSLNHVVFNESIEVKEARVESVKPLAETESIPAVMEDLLQSWSTSVVYILALLICIFIYYVGRSVTSNKTKTCTAPQAGGALPIIGHLHLFGGKKLLFETLCTLAEKYGPAFTIKMGSNKVLVLSSWEMAKECFSEHDKAFADRPLVTASKLLGYDGAMFGFAPYSPYWREMRKIVTIHVLSNHRIDLLKHIRASEVEMAMRELYGLWSSKGCPENGISVEMKQWFSDLAFNIILRMISCKRYFGVSSEDGKAQDFQKIIRDFVNLFGVPVLADSIPALWWWDIHGYKKKMKKTAQKLDQLLGEWLAEHKQRRRLGKDAEEELDFMDVMLRVLEENPIAYFDTDTIIKSTLLNLLAGSDSIMVAITWTLCLLLNNPQVLKKAQDELDNKIGRNRQVKESDIKDLVYLQAIVKESLRVSSPSGVIFPRSAMKDCTLSNGYHVPAGTKVMINIWKIMHDEQLWPDPYSFQPERFLCSSHKDIDVRGQHFELLPFGSGRRSCPGISLALSVMHLILAALLHSFEITTPSNEPVDMTKGIGLTNMKATPLEVLLVPRLNCVL 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30283g00022 877 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 160 256 IPR018866 -
Stsc30283g00022 877 Pfam Cytochrome P450 395 855 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 CDD CYP82 428 872 - -
Stsc30283g00022 877 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 811 820 IPR017972 GO:0005506|GO:0016705
Stsc30283g00022 877 PANTHER CYTOCHROME P450 82C3-RELATED 372 874 - -
Stsc30283g00022 877 Gene3D Cytochrome P450 387 875 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 FunFam Cytochrome P450 82C4 384 870 - -
Stsc30283g00022 877 PRINTS P450 superfamily signature 728 739 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS P450 superfamily signature 809 818 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS P450 superfamily signature 675 692 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS P450 superfamily signature 818 829 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 Coils Coil 698 718 - -
Stsc30283g00022 877 PRINTS E-class P450 group I signature 684 710 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS E-class P450 group I signature 727 745 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS E-class P450 group I signature 818 841 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS E-class P450 group I signature 769 793 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS E-class P450 group I signature 808 818 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS E-class P450 group I signature 424 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 PRINTS E-class P450 group I signature 448 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 MobiDBLite consensus disorder prediction 1 33 - -
Stsc30283g00022 877 MobiDBLite consensus disorder prediction 7 28 - -
Stsc30283g00022 877 MobiDBLite consensus disorder prediction 67 90 - -
Stsc30283g00022 877 SUPERFAMILY Cytochrome P450 401 872 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00022 877 Coils Coil 603 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30283g00022 Stsc-Chr30283 97627 102246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30283g00022 368 873 Cytochrome P450 AT4G31940 48.256 3.24e-174 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30283g00022 - - qsu:112038068 652.899