Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30283g00021 ATGGATACCTTCCAGCTCAAAATTCTGATTTCAATCATCCTTTCCCTCTTCATTAGTGCTTCCATTTGTTACTTTTTAAAGAAAACACAAACTACCAACAAAAAGAAACAATGCAGTGCCCCTCTAGCAAGGGGTGCATGGCCTATTGTTGGACATCTTCACCTCTTTGGAAGCCATCAACTCACACACAGAACACTTGGTGCTATGGCTGATGAACATGGACCAATCTTCACTATTAAACTTGGTTCATACAAAGTTCTTGTGTTGAGTAGCTGTGAGATGGTGAAGGAATGCTTTACCATCCATGACAAAGCATTCTCCACAAGACCTTGTGTTGCAGCCTCAAAGCTAATGGGATATGACTGTGCCATGTTTGGTTTCACTCCTTATGGACCTTACTGGCGCGAGATTAGGAAGCTAACTACTCTTGAGCTTCTCTCAAACCATAGACTTGAACTCCTCAAGAAAACAAGAAGTACTGAGTTGGATTCTGCAATAAGGAAGCTTTACAAGACAGAAGAAGGAGGGGTTTTGGTTGATATGAAGGAGTGGTTTGGCAATTTGACACATAATGTTTCTTTGAGAATGGTGGGAGGGAGGCCATACTATGGGGAAAGTGGTGATGGCTATGAAGAAAGTGAAGAAGCTAGGAGATATAAGAAGGCTATGAGAGAGTGTGTGCGTTTGTTTGGGGTGTTTGTGTTGTCTGATGCAATTCCATCTCTTGGTTGGTTAGATTTCAAGGGACATGAGAAGGCTATGAAGAAAACAGCTAGTGAAATGGATACTCTGGTTAAAGGGTGGCTTGATGAACACAAAAGGAAAAGAGCTTCCAATAAGGAAGAGCAGGATTTCATGGATGTCATGCTTAATTCTCTGCAGAATGATCATGTTTTTGGTTATAGTTCTGATACCATCATCAAGGCTACTTGTTTGAATCTGATACTAGCAGGAAGTGATGCCATCATGGTTACTCTAACATGGGCGCTATCTCTGCTACTCAACAACAAAACTGAACTCAAAAGGGTGCAAGAAGAGATCAACATTCACATCGGAAGCGAGAGGAAGGTAGAAGAATCAGACATAAGCAAGTTAGTGTACTTGCAAGCAGTAGTGAAAGAAACTCTAAGACTATATCCACCAAGTCCCATCATAACCTTTCGTGCAGCCATGGAAGACTGCACTTTCTCATGCGGATATCACATCCCTGCAGGCACACACCTAATGGTGAATGCATGGAAGATCCACAGGGATGGTCGTGTATGGGAAGATCCACAAGATTTCAAGCCCCAAAGGTTCTTGACAACACACAAGCATGTTGATGTGAGAGGTCAGAACTTTGAGCTTGTGCCTTTCAGTTCTGGAAGGAGGGCTTGCCCTGGAGCCTCCCTTGCTCTGCGTGTTGTGCATTTAACGTTGGCTAGGTTGTTACAATCTTTTCAAATTGAATCTCCTTCAGATGAAGCTGTAGACATGACAGAGAGCTTTGGCCTCACCAATTTGAAAGCCACCCCACTTCAAGTTCTCCTAACACCACGTCTACAACCCAAGCTTTATGAGCACTAG 1566 0.4304 MDTFQLKILISIILSLFISASICYFLKKTQTTNKKKQCSAPLARGAWPIVGHLHLFGSHQLTHRTLGAMADEHGPIFTIKLGSYKVLVLSSCEMVKECFTIHDKAFSTRPCVAASKLMGYDCAMFGFTPYGPYWREIRKLTTLELLSNHRLELLKKTRSTELDSAIRKLYKTEEGGVLVDMKEWFGNLTHNVSLRMVGGRPYYGESGDGYEESEEARRYKKAMRECVRLFGVFVLSDAIPSLGWLDFKGHEKAMKKTASEMDTLVKGWLDEHKRKRASNKEEQDFMDVMLNSLQNDHVFGYSSDTIIKATCLNLILAGSDAIMVTLTWALSLLLNNKTELKRVQEEINIHIGSERKVEESDISKLVYLQAVVKETLRLYPPSPIITFRAAMEDCTFSCGYHIPAGTHLMVNAWKIHRDGRVWEDPQDFKPQRFLTTHKHVDVRGQNFELVPFSSGRRACPGASLALRVVHLTLARLLQSFQIESPSDEAVDMTESFGLTNLKATPLQVLLTPRLQPKLYEH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30283g00021 521 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PANTHER CYTOCHROME P450 82C3-RELATED 21 519 - -
Stsc30283g00021 521 CDD CYP82 74 513 - -
Stsc30283g00021 521 Gene3D Cytochrome P450 24 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 FunFam Cytochrome P450 82C4 30 511 - -
Stsc30283g00021 521 Pfam Cytochrome P450 46 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 SUPERFAMILY Cytochrome P450 46 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30283g00021 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30283g00021 Stsc-Chr30283 94055 95781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30283g00021 13 519 Cytochrome P450 AT4G31970 50.096 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30283g00021 - - gmx:606549 770