Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30282g00012 ATGGATTTCGAAAATCTTCTCTCCCAACCAGCCATATTCACCATAGTTGTGCTATTCTTCTCTCTCTTGGCTTTTTCTTTTTCATTTCTATCAAGAAGGCACATCCAGAAAGACGGAGTAAGAAAGGCACCACCGGAAGCTGGCGGAGCATGGCCCCTAATCGGGCACCTCCACCTCCTACGTGGCCCAGAGCTACTGCACGTGACCTTGGGCAACATGGCTGACAAATATGGACCCATCTTCACCATACGCTTTGGCGGCCGCAAGAGCTTGATCATCAGCAACAACGAGCTAGCCAAACAGTGTTTCACTGTGAACGACAAAGCTTTCGCTGGTCGCTCTAAAACAATATCCTCTCAAGTTTTGGGTTATGACAGTGCTATGTTTTCCTTTAAAACATACGGCGCCTGTTGGAATAGCCTCCGCAAGATGGCCATCTCGGAACTCCTCTCCAACCACAAGATAGAGATGAACAAGCACGTGAGGCTGTCGGAGATAAAGTCTGCAATGAAAGATAGTTACAACAACAACAAAAATAAGAGTATGGCGGTTACGGAGCTGGATAAATGGTTTGGGGAGATTAGCCTAAACGTGATGTTCAGGTTGGTGGTGGGAAAACGTTTCACTGGATACAGTGAAGAGAATGAACGGATTCGGGAGACGTTTAGGATTTTCTTTGATCTTGCTGCATCTTTGTTGGTTGGTGATGCAATTCCGTGGTTGAGATGGTTGGATCTGGACGGGGGAGAGAAGGCCATGAAGAAAATAGCCAAAGAGTTGGATGAATTTATGCAGACATGGTTAGATGAACACAAACGCAGCAGAAATCAAAGCGCAGATCGTGATTTCATGGACGCTCTTATTTCTAATATCGATCAAGGCTTTGACGGTTACGACGTTGATACTCTAGTCAAAGCTTCATCCCTGGCACTAATTTTAGGAGGTACAGACACAACAATTGCAACATCAACTTGGGCCATTTCTTTACTTTTGAACAATCGCCAAGTCTTAAATAAACTGGTTCATGAATTAGACACACAAATAGGAACAAAAAGATCAGTGATCGAAGAGGATCTAAACAATATTGTTTATCTCCAGGCTGTTATCAAAGAAACATTGCGCTTGTACCCTCCTGTGGTACTCAATGCGCCTCACGAATCCATGGAAGATTGTGTGGTGGGTGGATACCATATCCCTGCTGGTACAATGCTCTTGACTAATATTTGGAAAATGCAACGGGATCCTGTTTTGTATCACAATCCTTTGGAATTTCGACCTGAGAGATTTCTCACAACTCACAAAGACATCGACTTTAGGGGTCAGCACTTTGAATTGATTCCATTTGGTGCTGGAAGAAGGATTTGTCCTGGAATGTCATTTGCTCTTCAAATGGTGCAGTTGACACTTGCTAATGTGCTTCATGGGTTTGACATTGTAACAGCCGATGGAAAACCAGTTGATATGGCTGAACGTACTGGGCTAACCAATACCAAAGCCAATCCACTCAAAGTCATTTTAACACCACGTCTCTCTCCTAATGCTTATGCTTAA 1551 0.4391 MDFENLLSQPAIFTIVVLFFSLLAFSFSFLSRRHIQKDGVRKAPPEAGGAWPLIGHLHLLRGPELLHVTLGNMADKYGPIFTIRFGGRKSLIISNNELAKQCFTVNDKAFAGRSKTISSQVLGYDSAMFSFKTYGACWNSLRKMAISELLSNHKIEMNKHVRLSEIKSAMKDSYNNNKNKSMAVTELDKWFGEISLNVMFRLVVGKRFTGYSEENERIRETFRIFFDLAASLLVGDAIPWLRWLDLDGGEKAMKKIAKELDEFMQTWLDEHKRSRNQSADRDFMDALISNIDQGFDGYDVDTLVKASSLALILGGTDTTIATSTWAISLLLNNRQVLNKLVHELDTQIGTKRSVIEEDLNNIVYLQAVIKETLRLYPPVVLNAPHESMEDCVVGGYHIPAGTMLLTNIWKMQRDPVLYHNPLEFRPERFLTTHKDIDFRGQHFELIPFGAGRRICPGMSFALQMVQLTLANVLHGFDIVTADGKPVDMAERTGLTNTKANPLKVILTPRLSPNAYA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30282g00012 516 Pfam Cytochrome P450 47 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PANTHER CYTOCHROME P450 82C3-RELATED 20 515 - -
Stsc30282g00012 516 FunFam Cytochrome P450 82C4 34 507 - -
Stsc30282g00012 516 SUPERFAMILY Cytochrome P450 50 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 Gene3D Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Stsc30282g00012 516 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30282g00012 516 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30282g00012 Stsc-Chr30282 111407 114639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30282g00012 45 510 Cytochrome P450 AT4G31940 47.531 5.51e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30282g00012 - - gmx:100787630 639.802