Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30281g00009 ATGGCAAATAACAATGCAACGCTACTCTCACTTGAGATGAAGGATGTTGAGATCATCAAACCTTCGAAACCAACACCTTCTTGTATTCTTTCTCTATCAAGTATTGACAACAATCCTCAGCTCGACATTCTTTGTCATATCATCTATGCATACCAAGCAAATCTTGATGATGACCCAAAAGCCCAATTGTTATCAGATCCTTCTTATGTGATAAAACAAGGTCTTTCAGAGGCTTTGGTTTACTATTACCCTCTAGCAGGGAAGATAATAACAAATAGTGGTGATGGAAGGCTTGGAATCAAGTGCAATAGTGCAAATGATGGAGTTCCATTCTTGGAGGCAAATGCTAATTGTGAACTCTCTTCTCTTAACTATCTTGAAGGGATTGATGTTCCAACAGCACAGAAATTGGTGTTTGATTATGATAACAACCATTCTCTTCATCATCATCATGATCAAACTAGTCAACACCCCTTGGTTTTCAAGGTGACAAAGTTTCTTTGTGGTGGTTTCACAATTGGAATGGGGTTGTCACATGCGGTTTGTGACGGTTTTGGAGCATCACAATTCTTTAGAGCTGTTGCTGAACTTGCAAGTGGGAAAAGTGAGCCTTCTGTTAAACCTGTGTGGGAGAGGGAGAGACTAATTGGAACAGTTCTCAAGCAACCACTGAAGTTTCCCATAGATAAAACTTCAATGGCAGTTTCACCATTTTGGCCATCTAATGAACTTTCACATGAATGCTTTCACTTCAATGGTGAGAGCATAAGAAGGCTCAAAATGGAACTGATGAAGGAAAGTAGTGATGATAATAATGGCAAGGAAAGCTTCACAACTCTTGAAGCACTTGGTGCCTATGTTTGGAGGTCAAAGGCTAGAGCTATGGAATTGAGCAGTGATGGGAAAACTTTGTTGTGCATAGCAGTTGGTGTGAGGCACCTATTGGATCCACCTTTGCCAGAAGGGATTGGTGGTTTAGGAGCACCAATGGTATTAACAGATTGGAGGCAACTGGGATTGTTGGATGAAGTGAATTTTGGATGGAAAGCTTCAGTTAATATGATACCTCTCCCATGGAACATGTTTGGCTATGTGGATTTGGCCCTTTTCCTGCCTCCTAGTAATTTTGATCCTTCAATGAAAGGAGGTGTTAGAGTCTATGTTTCACTTCCAAAAGCTTCCATGCCCAAGTTCAAGGAGGAGATGGAGGTTCTCAAGTTTATCAAGGATGAAGAAAGCAAGGTTGTCAAACTCGAGACTTGA 1263 0.4086 MANNNATLLSLEMKDVEIIKPSKPTPSCILSLSSIDNNPQLDILCHIIYAYQANLDDDPKAQLLSDPSYVIKQGLSEALVYYYPLAGKIITNSGDGRLGIKCNSANDGVPFLEANANCELSSLNYLEGIDVPTAQKLVFDYDNNHSLHHHHDQTSQHPLVFKVTKFLCGGFTIGMGLSHAVCDGFGASQFFRAVAELASGKSEPSVKPVWERERLIGTVLKQPLKFPIDKTSMAVSPFWPSNELSHECFHFNGESIRRLKMELMKESSDDNNGKESFTTLEALGAYVWRSKARAMELSSDGKTLLCIAVGVRHLLDPPLPEGIGGLGAPMVLTDWRQLGLLDEVNFGWKASVNMIPLPWNMFGYVDLALFLPPSNFDPSMKGGVRVYVSLPKASMPKFKEEMEVLKFIKDEESKVVKLET 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30281g00009 420 PANTHER ACYL TRANSFERASE 4 330 403 - -
Stsc30281g00009 420 Pfam Transferase family 328 404 - -
Stsc30281g00009 420 Pfam Transferase family 10 323 - -
Stsc30281g00009 420 Gene3D - 7 223 IPR023213 -
Stsc30281g00009 420 Gene3D - 326 402 IPR023213 -
Stsc30281g00009 420 Gene3D - 234 325 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30281g00009 Stsc-Chr30281 56347 58166 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30281g00009 9 325 Monolignol Biosynthesis Gene Families AT5G48930 29.102 1.46e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30281g00009 K20240 - gmx:100801843 460.299