Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30281g00004 ATGGCATATGAAAAACCATTCCTTGACCTTAAGCTTAGCGTGGAAGATGTTATACTAGTAAAACCATCAAAACCAACTCCTTCATCTGTTCTCTCTCTTTCCACAATTGATAACAGACCTGAACTTCATAGTCTATGTCAAACCATTCACATTTTTGAACCCTCAAATAACATTATTCTTAATGATGACCCTGCACTTGTGATCAAAGAAGCACTCTCCAATGCTTTGTTCTATTACTACCCTCTCGCTGGAAGGCTTGTAAAACATGCTGATGGGAAACTTAGAATCCATTGCAATGCATATGGAGTTCCATTTGTGGAAGCCATTGCAAATTGCAAGCTTTCTTGCCTTCACTACCTTGATGGTAGTGACACTGAAAATGCAAAACACTTAGCATTTGATAATCCTTTTCATGAAAATGGTGATGATGATGGTTACCAGTATCCTTTGGGGATAAAGGTGACCAAGTTTCTCTGTGGCGGGTTCACAGTCGGAATAGGCGCATCACATGCTGTTTTTGATGGATATGGAGGGTCTCAGTTCTTTCAAGCCATAGCTGAACTCGCGAGTGGAAAAGGTGAGCCATCTGTGAAGCCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAATTACAGAATATCCATTGCAAAGTCCCATGGACGAAGCCTCCGCCGCGGTTTCACCTTATTTGCCCACCACAAAACTTGCGCATGGATGCTTTAAGATGATCAAGGAGACTAAGAAACTCGGTTTTTCAAGGGAGTATATTATGAATGCTGTTGACACCAAGGAGACAGAAAGTGAACACTTTGATTATCAGGGTATTGGTGCATCTATGGTTCTGTCTAATTGGATGCATTTGGGTATGTTGGAAAACATGGACATAGGGAGGTTTAGGATCTTTGTTTCTCTACCTAGTGATGCTATGCCGAAGTTCAAGGAGGAGATGGAAGCTCTCTTGCTTGTTAAACCATAG 975 0.4185 MAYEKPFLDLKLSVEDVILVKPSKPTPSSVLSLSTIDNRPELHSLCQTIHIFEPSNNIILNDDPALVIKEALSNALFYYYPLAGRLVKHADGKLRIHCNAYGVPFVEAIANCKLSCLHYLDGSDTENAKHLAFDNPFHENGDDDGYQYPLGIKVTKFLCGGFTVGIGASHAVFDGYGGSQFFQAIAELASGKGEPSVKPVWERERLNGSITEYPLQSPMDEASAAVSPYLPTTKLAHGCFKMIKETKKLGFSREYIMNAVDTKETESEHFDYQGIGASMVLSNWMHLGMLENMDIGRFRIFVSLPSDAMPKFKEEMEALLLVKP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30281g00004 324 Gene3D - 7 214 IPR023213 -
Stsc30281g00004 324 Pfam Transferase family 18 211 - -
Stsc30281g00004 324 PANTHER ACYL TRANSFERASE 4 14 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30281g00004 Stsc-Chr30281 34992 36294 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30281g00004 10 191 Monolignol Biosynthesis Gene Families AT5G48930 32.609 5.41e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30281g00004 K20240 - gmx:100801843 283.493