Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30281g00003 ATGGTCATCGACAAACACTACAAGAAACGCGCCCGTTACCGGCGGAATTTGGGGCGGACGTTACAGGGGGAATTTGGGGCAAAATTACCAGTGGATTTTGGGCAAAATTTAGGGCAAGGGAAACTTATCGGCGGATTTTATAATCCGAAGCAAAATCCGCCGGTTACACTCAATAATAGAGGAAACGCGGTCTTATTTCTCACTCCCCCATTTCGAACCCTAACTCAACTCTCTCTCTTCTCTCTCACCACGACGACTTCTGTGCAAGTCACCACCGCTGTCGCCCACTCTCCCATAGGGAACCGTCAAGGACAGTGCTTCGAACACCGCAAACACCCAGATCTTGCTGCTGTTCAACCACCATCGCTGCGAAGCCACCGTCTCCTAGGTCGTTTACTCATCGTGCAGACCAGCCAGTTTGGGTTCCAAAACCCCAAGCCATTGCTGCTGGTCTCATCACTGCCATGGGTTCGCCACTTCACCGTCTCTCCACTTCTCGCTGTGTCTTCCCTTTACCTCAACTTCTTCCCTTTTACCTCCATAATTGCCGGTGGTCCTTGGTTCACACTTAGGGCTAATGGGGAGGAGTTCTTTACATCTTATGATGAAGTTTATGATAGCTTTGATGCCATGGGATTGCAAGAGAACCTTCTGAGGGGAATTTCTGCATATGTTATGTACTATGTAGATTATCGTTTTGAGAAGCCCTCTGCAATTCAGCAAAGGGGGATTATGCCTTTCATCAAGGGACTTGATGTAATTCAGCAAGCACAATTTGAAACTAAAAAAATTGCTACTTTTTGCTCTGGTGTTTTGCAGCATTCAGATTAA 831 0.4717 MVIDKHYKKRARYRRNLGRTLQGEFGAKLPVDFGQNLGQGKLIGGFYNPKQNPPVTLNNRGNAVLFLTPPFRTLTQLSLFSLTTTTSVQVTTAVAHSPIGNRQGQCFEHRKHPDLAAVQPPSLRSHRLLGRLLIVQTSQFGFQNPKPLLLVSSLPWVRHFTVSPLLAVSSLYLNFFPFTSIIAGGPWFTLRANGEEFFTSYDEVYDSFDAMGLQENLLRGISAYVMYYVDYRFEKPSAIQQRGIMPFIKGLDVIQQAQFETKKIATFCSGVLQHSD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30281g00003 276 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 206 241 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30281g00003 Stsc-Chr30281 24611 26253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30281g00003 195 276 Eukaryotic Initiation Factors Gene Family AT3G13920 74.390 1.14e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30281g00003 K03257 - egt:105967087 126.331