Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30281g00002 ATGGCATCTGAAAAACCATTCCTTGACCTTAAGCTTAGCGTGGAAGATGTTATACTAGTAAAACCATCAAAACCAACTCCTTCATTTAATCTCTCTTTATCCACAATTGATAACATATCTGAACTTAATAGTCTATGTCAAACCATTCACATATTTGAACCATCAAATAAAATTATTCTTAATGATGACCCTGCACTTGTGATCAAAGAAGCACTCTCCAAGGCTTTGTTCTATTACTACCCTCTTGCTGGAAGGCTTATAAAACATGCTGATGGGAAACTTAGAATCCATTGCAACGCATTTGGAGTTCCATTTGTGGAAGCCATTGCAAATTGCAAACTTTCTTGCCTTCAATACCTTGATGCTAGTGACTCTGAAAATGCAAAACACTTAGCATTTGATAATCCTTTGCATGAAGATGGTGAAGAAAATGGTTACCAATATCCTTTGGGGATAAAGGTGTCCAAGTTTCTCTGTGGCGGGTTCACAGTTGGAATAGGCGCATCACATGCTGTTTTTGATGGATATGGAGGGTCTCAGTTCTTTCAAGCCATAGCTGAACTCGCGAGTGGAAAAAGTGAGCCATCTGTGAAGCCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAATTACAGAATATCCATTGCAAAGTCCCATGGACGAAGCCTCCGCCGCGGTTTCACCTTATTTGCCCACCACAAAACTTGTGCATGGATGCTTTAAGATGATCAAGGAGACTAAGAAACTCGGTTTCTCAAGGGAGTATATCATGAATGCTGTTGATACAAAGGAGACAGAAAGTGAACACTTTGATTATCAAGGTATTGGTGCATCTATGGTTCCGTCTAATTGGATGCATTTGGGTATGTTGGAAAACATGAACATAGGGTGGGCAAAGCCAGTGAACATGATACCGGCACCATGCAACATGTTTGGAACAGTTGGAGTGTGCATTTTCTCAGCTCCTAGTGACTTGGATCCTTCAATGAAAGGAGGTGTTAGGATCTTTTTTTCTCTACCTGGTGATTCTATGCCCAAGTTCAAGGAGGAGATGGAAGCTCTCTTGCTTGTTAAACCATAG 1080 0.4111 MASEKPFLDLKLSVEDVILVKPSKPTPSFNLSLSTIDNISELNSLCQTIHIFEPSNKIILNDDPALVIKEALSKALFYYYPLAGRLIKHADGKLRIHCNAFGVPFVEAIANCKLSCLQYLDASDSENAKHLAFDNPLHEDGEENGYQYPLGIKVSKFLCGGFTVGIGASHAVFDGYGGSQFFQAIAELASGKSEPSVKPVWERERLNGSITEYPLQSPMDEASAAVSPYLPTTKLVHGCFKMIKETKKLGFSREYIMNAVDTKETESEHFDYQGIGASMVPSNWMHLGMLENMNIGWAKPVNMIPAPCNMFGTVGVCIFSAPSDLDPSMKGGVRIFFSLPGDSMPKFKEEMEALLLVKP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30281g00002 359 Pfam Transferase family 18 212 - -
Stsc30281g00002 359 Pfam Transferase family 238 353 - -
Stsc30281g00002 359 PANTHER ACYL TRANSFERASE 4 240 353 - -
Stsc30281g00002 359 Gene3D - 212 356 IPR023213 -
Stsc30281g00002 359 Gene3D - 7 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30281g00002 Stsc-Chr30281 12032 13448 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30281g00002 10 208 Monolignol Biosynthesis Gene Families AT5G48930 30.000 4.23e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30281g00002 K20240 - gmx:100801843 270.396