Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30278g00031 ATGGAACCTTTCAAAGGTGTTCTAAATGACATTCGTGCAAGATCTTTGCACTATAAACAAGATTGGTCTTCTGCTATTCACTCAGGATTTGGGATATTGGCTCCAACTACCTATATTTTCTTTGCTTCTGCGCTTCCTGTTATTGCATTCGGAGAGCAGATCAGTAGAGACACAGATGGAAGTTTGAGTACAGTAGAAACACTGGCTTCTACAGCCATATGTGGAATCATACACTCAATATTCGGTGGTCAACCTCTTCTCATACTTGGAGTTGCTGAACCAACTATCATCATGTATACTTACCTCTACAACTTTGCCAAACATAGGAATGGTTTGGGACAACAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTTTGGACCGCTCTCTTGTTATTTCTTCTAGCAATATTCAATGCTGGAAATATCATCAATAGATTTACAAGGATTGCTGGTGAACTTTTTGGAATGCTGATTACTGTCTTGTTCATTCAACAGGCTATTAAGGGAATGGTGAGTGAGTTTAAGGTTCCTAAGGAGGGAAACCCAGCACTGGATAAGTACCAGTTTCATTGGTTGTATGCTAATGGATTACTTGGTATTATATTCACCTTTGGCCTTCTCTATACTGCCTTAAAAAGCAGAAGAGCAAGGTCATGGTTATATGGAACAGGGTTGTTCAGAAATTTCATAGCAGATTATGGGGTGCCTCTCATGGTGCTGTTGTGGACAGGCCTATCATTCACAGTACCAAGTAAAGTGCCTTCTGGAGTTCCAAGAAGGCTTGTTTCTCCTCTTGCTTGGGATTCCACATCTTTGCATCATTGGACTGTGATCAAAGACATGGGCAAGGTTTCACCAACATATATATTTGCAGCTTTTATTCCTGCCATAATGATAGCAGGGCTTTATTTCTTTGACCACAGTGTTGCTTCCCAGTTAGCACAGCAGAAGGAATTCAACCTCAAGAAGCCTTCTGCATATCACTATGACATATTGCTACTTGGATTCATGGCATGTTTCTGTGTTACCTCTATAATAAGATGTTAA 1050 0.4057 MEPFKGVLNDIRARSLHYKQDWSSAIHSGFGILAPTTYIFFASALPVIAFGEQISRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTIIMYTYLYNFAKHRNGLGQQLFLAWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMLITVLFIQQAIKGMVSEFKVPKEGNPALDKYQFHWLYANGLLGIIFTFGLLYTALKSRRARSWLYGTGLFRNFIADYGVPLMVLLWTGLSFTVPSKVPSGVPRRLVSPLAWDSTSLHHWTVIKDMGKVSPTYIFAAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMACFCVTSIIRC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30278g00031 349 Gene3D Helical hairpin bin 14 55 - -
Stsc30278g00031 349 Pfam HCO3- transporter family 196 342 IPR011531 GO:0006820|GO:0016020
Stsc30278g00031 349 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Stsc30278g00031 349 PANTHER ANION EXCHANGE PROTEIN 2 342 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30278g00031 Stsc-Chr30278 98549 100140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30278g00031 2 342 Antiporters AT1G74810 77.419 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30278g00031 K24194 - gmx:100811184 588.571