Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30278g00030 ATGCACACCAAAAGCCTGGCTGTTCTCAAGAAACAGTTGATACGAAAAAAGATGGTGAAAAGTGCCAAAGAAAGCATAAAGCAGAAAGCTAGCAAATCAGAAATCTATGGGAATCTGCAAGCTGTGTTTATAGAAATGGATAGCACTACTCAAGATAACCATTCAGTGGCCAAAGAACTAGCTGATTTGAAAGAGATTGTACTAAATGGTGAAGATAAAGGAGAAAACAAGGAGAACACATTTGATCCTGAGAAACACATTGATGCATATCTACCTGTGAGAGTAAATGAGCAGAGAGTTAGCAATCTCTTACAATCACTCCTTGTTGGAGCATCAGTCTTTGCTATGCCTGCCATAAAAAAGATACCAACTTCAGTTCTATGGGGATACTTTGCTTACATGGCCATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGAATAAAACTACTCTTTGTCACACCTAGTAGGTGGTACAAGCTGTTGGAAGGGGATCATGCTTCTTTTGTTGAGTCAGTACCATTCAAATACATAGTGTTCTTCACACTGTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTGACATGGATACCTATAGCTGGAATATTGTTCCCCTTGCCATTCTTTGTGTTGATCACACTGAGGCAGCATATACTCCCTAAGTTCTTCATTGCTCACCATCTAGGGGAACTAGATGCAGCTGAATATGAAGAAATAGCAGGTGCTCCAAGATTGAGCTTCACTATGTCTTTTAAGGAGGGGGAATCATCTATTGTTGGATCAAGAGAAAAAGGTGATGCTGAAATGTTAGATGAGTTAACTACTAGCAGAGGAGAGGTCAAGGTCAGAACTTTTAGCTTCACTGAAGAAAGACATAGCCAGAGTTTGCAGGTATATCCAGATGAAATAGTGAATGAAATGGATCCACACTGA 936 0.3974 MHTKSLAVLKKQLIRKKMVKSAKESIKQKASKSEIYGNLQAVFIEMDSTTQDNHSVAKELADLKEIVLNGEDKGENKENTFDPEKHIDAYLPVRVNEQRVSNLLQSLLVGASVFAMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERIKLLFVTPSRWYKLLEGDHASFVESVPFKYIVFFTLFQCVYFLVCFGVTWIPIAGILFPLPFFVLITLRQHILPKFFIAHHLGELDAAEYEEIAGAPRLSFTMSFKEGESSIVGSREKGDAEMLDELTTSRGEVKVRTFSFTEERHSQSLQVYPDEIVNEMDPH 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30278g00030 311 Pfam HCO3- transporter family 93 183 IPR011531 GO:0006820|GO:0016020
Stsc30278g00030 311 PANTHER ANION EXCHANGE PROTEIN 1 241 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30278g00030 Stsc-Chr30278 97159 98453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30278g00030 1 309 Antiporters AT1G15460 62.939 4.13e-135 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30278g00030 K24194 - gmx:100811184 509.22