Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30278g00024 ATGTCTGATTTGAGTGATAATTTGTGGTGCAGACACAATTTTCATGGCGTAGATCACAATCACAGGCCGCACATGACAAGCCAAGCTGCTTCTCAAGCAATGAAGAACCTTTGTGCACAACACGGAGGTCAACTTAGGCTCGGCCACTTCCGCCTCTTGCGCCTCCTGGGCTCCGGCGATATTGGAAAAGTTTTCCTCTGTGAGATCAGCAAGTCCTTGAAGGCACACTCCAATTGTTACTATGCAATGAAAGTAGTGGACAGAAAGTCTCTGGCTCTCAAGAAGAAGCTGAAGAGAGCAGAGATGGAGGAACAAGTACTTAGTGTTATTGACCACCCTTTTCTGCCAACTCTTCATGCAAAATTTGAAGCTCATCAATACACATGTTTTGTCATGGATTACTGCCCTGGTGGCGACCTCTTCACGCTTCAGCAGAACCAGCCAGATCTTCGCTTTACCGTCTCCACAGCAAGATTCTTTGCGGCTGAGGTGCTTGTAGCTCTTGAATATCTGCATATGATGGGGATTGTGTATAGAGACCTGAAGCCAGAAAATGTGCTTATTCAAGAGGATGGACACATCATGCTCACTGACTTTGATCTCTCCCTTCACTTGGAAGTTCACCCCACGCTTCTTAAACAAGTTTCCAGCAATAGGATCATGAAGAAGAAGAAGAATAAGCCAATGCTGTGTTGCAGAGAATCATATGATTATGAGCATGCAGCTACTACCAGAAGGAGTAGGAAGAAAGCAAGCATTATTGGTGGTGATGTCCATGGACAAGAGATTGAGGTTTCAGCTGAACCGGTGAATGGAAGATCACATTCTTTTGTTGGAACTCATGAGTATTTGGCACCAGAAGTGATCTTGGGGTTAGGTCATGGAAGTGCTGTGGATTGGTGGGCATTTGGTGTGTTCCTCTATGAGCTGTTATATGGATATACACCTTTCAAAGATGCATCAAGCAATGACAAAACAATGAATAATATCCTGAGGAAGAGGTTGAGTTTCCCAAGATCAGGAACAAAGACTCATTCTGAGGCAGAGGATCTTATTGGTAAGCTTCTGATCAAGAATCCAAAGAGGAGAATGGGATACAACACTGGATCTTGTGAGATTAAGAAACATGAGTTCTTTCAGGGGATTAACTGGGCCTTAATCAGATCAACTAAACCACCTCTTCTTCCAGGAAATCCACACCAGCAAAAACGGAATTCACTTGACATGCCGAAACCAAGCTTCAAGAACAAGCCTGCGGGTCGAATACCCTTCTTCTGA 1278 0.4429 MSDLSDNLWCRHNFHGVDHNHRPHMTSQAASQAMKNLCAQHGGQLRLGHFRLLRLLGSGDIGKVFLCEISKSLKAHSNCYYAMKVVDRKSLALKKKLKRAEMEEQVLSVIDHPFLPTLHAKFEAHQYTCFVMDYCPGGDLFTLQQNQPDLRFTVSTARFFAAEVLVALEYLHMMGIVYRDLKPENVLIQEDGHIMLTDFDLSLHLEVHPTLLKQVSSNRIMKKKKNKPMLCCRESYDYEHAATTRRSRKKASIIGGDVHGQEIEVSAEPVNGRSHSFVGTHEYLAPEVILGLGHGSAVDWWAFGVFLYELLYGYTPFKDASSNDKTMNNILRKRLSFPRSGTKTHSEAEDLIGKLLIKNPKRRMGYNTGSCEIKKHEFFQGINWALIRSTKPPLLPGNPHQQKRNSLDMPKPSFKNKPAGRIPFF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30278g00024 425 MobiDBLite consensus disorder prediction 395 409 - -
Stsc30278g00024 425 Gene3D Transferase(Phosphotransferase) domain 1 135 204 - -
Stsc30278g00024 425 SUPERFAMILY Protein kinase-like (PK-like) 35 399 IPR011009 -
Stsc30278g00024 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Stsc30278g00024 425 FunFam Serine/threonine-protein kinase OXI1 139 207 - -
Stsc30278g00024 425 PANTHER FLIPPASE KINASE 1-RELATED 18 402 - -
Stsc30278g00024 425 SMART serkin_6 50 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30278g00024 425 MobiDBLite consensus disorder prediction 393 425 - -
Stsc30278g00024 425 Gene3D Transferase(Phosphotransferase) domain 1 271 397 - -
Stsc30278g00024 425 ProSiteProfiles Protein kinase domain profile. 50 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30278g00024 425 Pfam Protein kinase domain 274 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30278g00024 425 Pfam Protein kinase domain 51 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30278g00024 425 Gene3D Phosphorylase Kinase; domain 1 49 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30278g00024 Stsc-Chr30278 71088 72447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30278g00024 15 396 AGC Kinase Gene Family AT2G26700 48.513 7.19e-137 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc30278g00024 Pkinase 1.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30278g00024 K08286 - qsa:O6P43_023061 430.254