Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30276g00024 ATGCAGAGCGTGGCTTTCACTCTCTCACCTTCCCTCCCTCTCCGCACTCCCCACGCGCCTCGCTCCAATTCCCTCCGTTTCCATCCACTCTCTCTCTCCGCCTCCAAATCCGACGCCGTTACTTCCAATGCAATCTCTTCTTCGTTCACGCGCCGCGCCTGGGCGCTTGATTCTTCTTCTTCCTCCTCCTCCGCCTTTAAGTTCCGCCCTCGCACTTCCGATCTCGACGCTGGCGGCCGCTTCGAGGCTAGAGCCGCCTCCGTTCCAGAGAGCGCCAGCGGCGGTGACAGCGCTGCTTCCGGCAGCTTGTTCAAGACTCTTGAGCTTGGCTCCCTCTTCGGCCTCTGGTACCTATTCAACATCTACTTCAATATCTATAATAAGCAGGTCTTGAAGGTGTATCATTTTCCAGTGACTGTGACTCTTGTTCAATTTGCTGTTGGAACTGTCCTTGTTTCGTTTATGTGGGGTTTGAATCTCTACAAGAGGCCGAAGATCACTGGTGCTCAGCTTGCAGCGATATTGCCATTGGCTCTCGTGCATACCTTGGGAAATCTTTTTACCAATATGAGTCTTGGAAAGGTGGCCGTATCGTTCACTCACACGATCAAAGCTATGGAGCCTTTCTTTTCAGTGGTCCTTTCCGCAATGTTCCTTGGAGAGATGCCTACTCCATGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGTGTTGCATTGGCATCTGTGACTGAGGCCTCTTTTAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATGTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAAGAAAGAGGATGCTATGGACAACATAACCCTCTTCTCTATAATAACAGTAATGTCCTTCTTCTTGTTAGCACCTGTGGCTTTTGTCATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGGTTTAAATATGAGACAAGTGTACATTAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTTCTTACATGATATTGCAGAGAGTATCACCTGTTACTCACTCTGTTGGCAACTGTGTGAAGAGGGTTGTGGTCATTGTTAGCTCTGTCATCTTCTTCCAAACACCCGTCTCTCCTGTGAACGCTTTCGGAACTGCTGTAGCTCTTGCTGGAGTTTTCCTCTACTCAAGAGTAAAGAGAATTAAGCCAAAGGCCAAGACAGCTTAA 1230 0.4829 MQSVAFTLSPSLPLRTPHAPRSNSLRFHPLSLSASKSDAVTSNAISSSFTRRAWALDSSSSSSSAFKFRPRTSDLDAGGRFEARAASVPESASGGDSAASGSLFKTLELGSLFGLWYLFNIYFNIYNKQVLKVYHFPVTVTLVQFAVGTVLVSFMWGLNLYKRPKITGAQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEMPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVSNQSRNVLSKKVMVKKEDAMDNITLFSIITVMSFFLLAPVAFVMEGVKFTPAYLQSAGLNMRQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAVALAGVFLYSRVKRIKPKAKTA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30276g00024 409 Pfam Triose-phosphate Transporter family 108 397 IPR004853 -
Stsc30276g00024 409 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
Stsc30276g00024 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 316 401 - -
Stsc30276g00024 409 PANTHER SOLUTE CARRIER FAMILY 35 108 401 - -
Stsc30276g00024 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 154 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30276g00024 Stsc-Chr30276 136886 140603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30276g00024 1 409 Antiporters AT5G33320 73.188 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30276g00024 K15283 - gmx:100804563 599.742