Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30273g00016 ATGGTAGATACTGGTGCCCGTGATTCGGGGATGAGTTTGGAGACTCTCAATTCCGCTCAGAGAACATCCATGAGCAGTGACAGCATCTGCAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCTAACTACCTCTCCTGACACCCTCTCCATCAAGCCACACCGCTCCTCTGACTTCGCATACTCCGCCACGTTTCGCCGCAAGTCCGCCCTCACCTTCCGCGATTTTCACCTCCTCCGCCGTATCGGCGCCGGTGACATCGGCACCGTGTACCTCTGCCGCCTCCGTGACTCCGATGAGTTCCCCTCCGCGGAGTACGACAACTCGAACGGCGAGGATGAATCCCCCGGTTGCTTGTACGCGATGAAGGTGGTGGACAAGGAGGCGGTTGCGCTGAAGAACAAATCGCAGAGAGCGGAAATGGAGAGGAAGATCCTGAAGATGGTGGACCACCCGTTCCTGCCAACGCTGTACGCGGAGTTTGAAGCGTCACAGTTTTCATGCATTGTGATGGAGTTTTGCCCAGGCGGCGACCTCCACTCCCTCCGGCACAAGCAAGCACAGAAACGGTTCCCTGTGTCGTGGGCAAGGTTTTACGCTGCGGAGGTACTAGTTGCTTTGGAGTACCTGCACATGCTGGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTCTCCGATTTCGATCTCTCCTTCTGCTCCCATGCAATCCCAGCCGTTGAACTTGAATCCCATCACTATTACCCACAACTACCCACTCGCACGCCACTCCTCTCCTGCCTCTTCCCTTCCAGGAAGCTTCACACGCTCAACCCCAACCGTCTCTTCGTCGCCGAGCCTGTCGGAGCACGATCATCCTCCTTCGTCGGAACTCACGAGTACGTTTCCCCCGAGGTTGCCTCCGGGAACTCCCATGGGAACGCCGTCGACTGGTGGTCCTTCGGGATCTTCCTCTACGAGCTCCTCTACGGTTACACGCCGTTTGCTGCAGCATCCAACGATGTGACACTGCGCAACATCATAAAGAAGCCGTTGGCCTTTCCCACAGCCGTGGCCTCCAGCACGCTTGAGCACCACGCGCGGGAACTCATAAGGGGCTTGCTCCACAAGGACCCCACTCGAAGACTGGGGTCGAAGCGGGGCGCTGCTGACGTCAAAAATCACCCTTTCTTCGGAGGGCTGAACCTGGCTCTCATAAGGATGTTGACCCCGCCGGAAGTGCCGTACCTGAGGAAGCAGAAAACGGTTCCAAGGAGTAGGAGTAGTAGGCGGGTGCAAGCAACGGCGTCGTTTGATTGCTTTTGA 1335 0.57 MVDTGARDSGMSLETLNSAQRTSMSSDSICSTSFSRLSFDLLTTSPDTLSIKPHRSSDFAYSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRDSDEFPSAEYDNSNGEDESPGCLYAMKVVDKEAVALKNKSQRAEMERKILKMVDHPFLPTLYAEFEASQFSCIVMEFCPGGDLHSLRHKQAQKRFPVSWARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSFCSHAIPAVELESHHYYPQLPTRTPLLSCLFPSRKLHTLNPNRLFVAEPVGARSSSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFLYELLYGYTPFAAASNDVTLRNIIKKPLAFPTAVASSTLEHHARELIRGLLHKDPTRRLGSKRGAADVKNHPFFGGLNLALIRMLTPPEVPYLRKQKTVPRSRSSRRVQATASFDCF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30273g00016 444 CDD STKc_phototropin_like 74 418 - -
Stsc30273g00016 444 FunFam protein kinase PINOID 174 242 - -
Stsc30273g00016 444 Gene3D Phosphorylase Kinase; domain 1 74 173 - -
Stsc30273g00016 444 Coils Coil 122 142 - -
Stsc30273g00016 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Stsc30273g00016 444 ProSiteProfiles Protein kinase domain profile. 76 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30273g00016 444 Gene3D Transferase(Phosphotransferase) domain 1 294 419 - -
Stsc30273g00016 444 SUPERFAMILY Protein kinase-like (PK-like) 61 427 IPR011009 -
Stsc30273g00016 444 Pfam Protein kinase domain 115 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30273g00016 444 Pfam Protein kinase domain 295 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30273g00016 444 PANTHER FLIPPASE KINASE 1-RELATED 22 422 - -
Stsc30273g00016 444 FunFam protein kinase PINOID 2 74 173 - -
Stsc30273g00016 444 SMART serkin_6 76 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30273g00016 444 Gene3D Transferase(Phosphotransferase) domain 1 174 241 - -
Stsc30273g00016 444 FunFam serine/threonine-protein kinase D6PK-like 293 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30273g00016 Stsc-Chr30273 65164 66962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30273g00016 8 444 AGC Kinase Gene Family AT2G34650 63.778 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc30273g00016 Pkinase 2.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30273g00016 - - gmx:100795536 620.928