Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30272g00002 | ATGAGCAGCTTCTTCACAAGAACAATAACAGCACAAACATCACCATCACCAAACTACGTTGGAGATGACTGCAAAAACTCAACACAACAATCTCTAACAAGTGGATACAAAACAAACCTCAACAGTGTCCTTTCATGGCTATCCTCTGATGCTGCCACAAGCAAGGGCTACAACCACACCGCCGTCGGAACCGCCACAAAAGATGCCGTCTATGGCCTCTATGACTGCAGAGGTGACGTGACGGGCACCTTCTGTCAGTTTTGCGTCTCCACTGCAGCTGCGGACATTCTTCAGCACTGTCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCCAACCATGACTTCATCGGAAACCTTACAACAACCCCATCATGGCAAATTCCTCAGACCAAGAACACCACCAACAGCACTCTAGAGCTCCAAAATGCAGAGACTAACATGCAGAGTTTGATAAAGAATGCTACTGTGGAGACCAAGCTGTTGTATGCAATGGGTGAGTTCAACTCTGGTGGGTCATTAGGGGAAAGGTATGGGCTGGTGCAGTGTAGTAGGGACCTTACTAGTGAGCAGTGTAGAGAGTGCTTGAATGATATGTTGGATCAAGTTCCTAAATGTTGTGCTACAAAAGTTGGATGGCAAGTTTTGGCTCCAAGTTGTTTGATCAAGTATGATGATTTTATGTTCTACAAGTTGGTTACTACTAGTCAAGCACCTTCTCCAGCCAACAAGAACGGTACAAGTAAGACAAAAACTATAGTCATCATAGTGAGTGTGTTGGTGGCAGTAATTCTACTAAGCTGTGGCATTTACTTTTTATGGCGGAGGAATCAATCAAACGATGAGGCATTATTGTCAGAGAGCGCCCCTATATCAACACATTATAACCCTCAAGGTCAAGGAGATGATTCATTGAATGCCGATCTTCCTACAATTCCTCTAATTTGGATTAGAAGGAGCACTAATAACTTTTCAGATTCTTGCAAATTAGGGGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTCTCAAAAACATCTGGTCAAGGTTTAGACGAGTTCAAGAATGAAGTAATCTTCATAGCCAAATTACAACATAGGAACCTTGTGAGATTGCTGGGTTGTTGTGTTGAGGAAAATGAAAAGCTGCTTGTGTACGAGTATATGTCCAATTCCAGTCTTGCCCTTCATCTATTCGACGTGGAAAAACGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATTAATGGAATTGCCAGAGGACTTCTATATCTTCACGAAGATTCTAGACTTAAAGTAATACATAGGGATTTGAAGGCCAGTAATGTTCTGCTTGATCAACATATGAATCCAAAAATATCAGATTTTGGATTAGCGAGAGCATTCGAAAAGGACCAAAATGAAGAAAATACTAGAAGAATTATGGGTACCTACGGATATATGGCTCCCGAATATGCAATGGAAGGGTTATACTCAGTAAAATCTGACGTTTTCAGTTTTGGAGTTCTTCTACTAGAAATCATTTGTGGCAAAAAGAACAGTGGATTCTATCTTTCAGAACATGGACAAAGTCTTCTTGTATATAGTTGGAGACTCTGGTGTGAAGGAGAATGTCTAAAGCTGGTAGATCCTATACTAGAAAATACATACACAAGAAATGAAGTTACAAGGTGTATTCATATTGGTTTGTTGTGTGTACAAGAAGATGCAGTAGATCGACCAACAATGTCTACAGTTATTGTTATGCTAGCAAGTGAGACAATGGCACTTCCTAAACCTAACCATCCTGCATTTTCAGTTGGAAGAAAGATCAATAAAGAAGAAGAGTCAACGTCAAAGGCATCTAATAAGGATTATCCTTCTGTCAATGAAGTATCAGTTTCTAATATTTTACCTAGATAA | 1956 | 0.4029 | MSSFFTRTITAQTSPSPNYVGDDCKNSTQQSLTSGYKTNLNSVLSWLSSDAATSKGYNHTAVGTATKDAVYGLYDCRGDVTGTFCQFCVSTAAADILQHCPNRSSAVIWYNYCILRYSNHDFIGNLTTTPSWQIPQTKNTTNSTLELQNAETNMQSLIKNATVETKLLYAMGEFNSGGSLGERYGLVQCSRDLTSEQCRECLNDMLDQVPKCCATKVGWQVLAPSCLIKYDDFMFYKLVTTSQAPSPANKNGTSKTKTIVIIVSVLVAVILLSCGIYFLWRRNQSNDEALLSESAPISTHYNPQGQGDDSLNADLPTIPLIWIRRSTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLDEFKNEVIFIAKLQHRNLVRLLGCCVEENEKLLVYEYMSNSSLALHLFDVEKRKQLSWKVRMNIINGIARGLLYLHEDSRLKVIHRDLKASNVLLDQHMNPKISDFGLARAFEKDQNEENTRRIMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGKKNSGFYLSEHGQSLLVYSWRLWCEGECLKLVDPILENTYTRNEVTRCIHIGLLCVQEDAVDRPTMSTVIVMLASETMALPKPNHPAFSVGRKINKEEESTSKASNKDYPSVNEVSVSNILPR | 651 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30272g00002 | 651 | Pfam | Protein tyrosine and serine/threonine kinase | 334 | 598 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30272g00002 | 651 | CDD | STKc_IRAK | 336 | 601 | - | - | |
Stsc30272g00002 | 651 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 297 | 405 | - | - | |
Stsc30272g00002 | 651 | SUPERFAMILY | Protein kinase-like (PK-like) | 315 | 616 | IPR011009 | - | |
Stsc30272g00002 | 651 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 28 | 647 | - | - | |
Stsc30272g00002 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 128 | 235 | IPR002902 | - | |
Stsc30272g00002 | 651 | MobiDBLite | consensus disorder prediction | 633 | 651 | - | - | |
Stsc30272g00002 | 651 | Gene3D | Transferase(Phosphotransferase) domain 1 | 406 | 611 | - | - | |
Stsc30272g00002 | 651 | SMART | serkin_6 | 330 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30272g00002 | 651 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 451 | 463 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc30272g00002 | 651 | Pfam | Domain of unknown function (DUF3403) | 603 | 651 | IPR021820 | GO:0004674 | |
Stsc30272g00002 | 651 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 405 | - | - | |
Stsc30272g00002 | 651 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 20 | 121 | - | - | |
Stsc30272g00002 | 651 | Pfam | Salt stress response/antifungal | 148 | 231 | IPR002902 | - | |
Stsc30272g00002 | 651 | Pfam | Salt stress response/antifungal | 24 | 119 | IPR002902 | - | |
Stsc30272g00002 | 651 | MobiDBLite | consensus disorder prediction | 612 | 651 | - | - | |
Stsc30272g00002 | 651 | Gene3D | - | 129 | 235 | IPR038408 | - | |
Stsc30272g00002 | 651 | Gene3D | - | 18 | 122 | IPR038408 | - | |
Stsc30272g00002 | 651 | ProSiteProfiles | Protein kinase domain profile. | 330 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30272g00002 | 651 | FunFam | Liguleless narrow1 | 406 | 609 | - | - | |
Stsc30272g00002 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 18 | 122 | IPR002902 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30272g00002 | Stsc-Chr30272 | 8100 | 13858 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30272g00002 | 3 | 651 | Receptor kinase-like Gene Family | AT4G05200 | 43.004 | 3.61e-177 | 518 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc30272g00002 | PK_Tyr_Ser-Thr | 3.2e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30272g00002 | - | - | ahf:112718031 | 1075.46 |