Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30270g00022 ATGCCGAATGGTTCTTTAGATAAGTTTATCTTCTCCAAAGTGGATAGTGCATCATTGACTTGCCAAAAACTTTATGAAATATCTCTTGGGGTGGCTCGTGGTATAGCTTATTTGCATGAAGGATGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCACAATATTCTTCTGGATGAGAATTTCATTCCTAAAGTGTCAGACTTTGGTCTTGCAAAACTTTATCCTCTTGACAACAGAATTGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCGAGTCAGAGAAGAAATTTGAATCCACATGCAGAGCATTCAAGCCAACTCTACTTTCCATTTTGGATTCATGGTCAGTTGGCTGAGAAAAATGATGAGGTGGAGATGGAAACTTTGGTGCATGAAGAAACAAGCGAGCTGGTAAAAAAAATGTTCATAACTGCACTGTGGTGTATACAATTGAAGCCATGTGATCGCCCTTCAATGAATAAAGTAGTGGAAATGTTAGAAGGGGATGTTGCAAGCATTGAAATGCCTCCAAGGCCTTCATTTTATCCAAATGATGATATGATTCACAGAGATTCAAATCATTCTTCTGGCTCTTCAGGTGTTGAGGAGGATACATCCAATCCTCTGTTGAAGTTTTCCGGATGA 657 0.3881 MPNGSLDKFIFSKVDSASLTCQKLYEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNRIADVYSFGMLLMEMASQRRNLNPHAEHSSQLYFPFWIHGQLAEKNDEVEMETLVHEETSELVKKMFITALWCIQLKPCDRPSMNKVVEMLEGDVASIEMPPRPSFYPNDDMIHRDSNHSSGSSGVEEDTSNPLLKFSG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30270g00022 218 MobiDBLite consensus disorder prediction 185 218 - -
Stsc30270g00022 218 MobiDBLite consensus disorder prediction 197 218 - -
Stsc30270g00022 218 SMART tyrkin_6 1 170 IPR020635 GO:0004713|GO:0006468
Stsc30270g00022 218 FunFam Os07g0541700 protein 1 85 - -
Stsc30270g00022 218 Pfam Protein kinase domain 2 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30270g00022 218 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 78 IPR045874 GO:0004672
Stsc30270g00022 218 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30270g00022 218 SUPERFAMILY Protein kinase-like (PK-like) 1 171 IPR011009 -
Stsc30270g00022 218 Gene3D Transferase(Phosphotransferase) domain 1 1 79 - -
Stsc30270g00022 218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Stsc30270g00022 218 Gene3D Transferase(Phosphotransferase) domain 1 80 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30270g00022 Stsc-Chr30270 148669 149339 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30270g00022 1 183 Receptor kinase-like Gene Family AT1G66910 44.131 5.70e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc30270g00022 Pkinase 3.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30270g00022 - - adu:110273082 344.354