Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30270g00021 | ATGGCAGCATCATTGCTCCTGCTTCTGCTTTTCAATTTGAATCACATCAACATTGGAATTTGCCAAGATGATCCTGTTCATTGTCCAGCCCGTCTGTACTGTACAAAAAACGAAACCAATATTCTTGAGCTCCCCGGAGTTTCATCCTCAGTAAAACTCCCCGTCAGTCACATTAATTTCAAATCAAACGCCTTAGAAGTGTATGAAGACGGAATCTGTTTGTCAGAACTCTTTCTCAGACTCAATTATTCATCATTCTTTCCGTTCAAGTTCATTAGAAGAGATTTATTTGTCTTTGATGAAATCTACCCACTTAAACCCACCAACATCACTTTCTTCCGTTGTCCTTCAAAGTACAAGACGTCATCTTGCCGGATTCAAGCAGCTGACGATCACGACGGTCTCGTCAGCTCGAATCTCCTACGCTGCACAAAACTATCTCAACAGGTTTTGCCAATACCGGCCGAATTTATAAGAAACAAAGGAGAAGATCAACGAAGAGTTGAAACTTTTTTGAAGGACTATGAGGCATTGAACCCAACAAGATTCTCTTATGCTGATATCAAGAGAATCACACAGCAATTCAAGGACAAGTTAGGCGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAACTGTCCAATCAAATTATTGTTGCTGTCAAGATTCTCAATACTACTGAAGGAGATGGCAAAGAGTTCATAAATGAAGTTGGAACTATGGCTAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTATTGTGCTGACGGATCTCACCGTGCTTTAGTTTACCACTTCTTTCCCAAAGGTAGTCTGCAGAGCTTCATTGCTCCAACCGAGAATGAAACCTTTCTCGGATGGAACAAGTTGCATCAGATTGCTCTGGGCATAGCGAAAGGGATTGAATATCTTCACCAAGGTTGTGATCAAAGAATTCTGCATTTCGACATTAATCCTCGCAATGTCTTGTTAGATGAAAGTCTCACTCCAAAAATATCAGACTTTGGTTTGGCTAAGTTATGCTCCAAGAATCGAAGTACGGTGTCCATGACTGCAGCCAGAGAAACTTTAGGGTACATGGCACCAGAAGTTTTCTCAAGAAACTTTGGCAATGTATCTTACAAATCTGATATCTACAGCTATGGTATGTTATTGCTTGAAATTGTTGGAGGAAGAAAAAACACAAATGCAAGTGAAGAAGCTTTTCAAGTTCTATATCCAAATTGGATACACAATTTGCTTGAAGGAGATGATACATATATTCCAATTGATGATGATGGAGATTTTAGAATTGTAAAGAAACTTGCAATAGTGGGACTGTGGTGCATTCAGTGGCACCCGGTGCACCGTCCCTCCATGAAAAGTGTAGTTCAGATGCTTGAAGGAGAGGAAGATAAGTTGAAAGTGCCACCGAATCCTTTTGAATCTGCAGCTGCCATAAGTTCAAGTGCAATTATTCCAGCAAGATTCTTGAATTTGGAATTGGAAGTAATTCCAGAAACAGAATAA | 1512 | 0.4034 | MAASLLLLLLFNLNHINIGICQDDPVHCPARLYCTKNETNILELPGVSSSVKLPVSHINFKSNALEVYEDGICLSELFLRLNYSSFFPFKFIRRDLFVFDEIYPLKPTNITFFRCPSKYKTSSCRIQAADDHDGLVSSNLLRCTKLSQQVLPIPAEFIRNKGEDQRRVETFLKDYEALNPTRFSYADIKRITQQFKDKLGEGAHGAVYKGKLSNQIIVAVKILNTTEGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPKGSLQSFIAPTENETFLGWNKLHQIALGIAKGIEYLHQGCDQRILHFDINPRNVLLDESLTPKISDFGLAKLCSKNRSTVSMTAARETLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNTNASEEAFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIVKKLAIVGLWCIQWHPVHRPSMKSVVQMLEGEEDKLKVPPNPFESAAAISSSAIIPARFLNLELEVIPETE | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30270g00021 | 503 | Gene3D | Phosphorylase Kinase; domain 1 | 168 | 267 | - | - | |
Stsc30270g00021 | 503 | FunFam | PR5-like receptor kinase | 268 | 473 | - | - | |
Stsc30270g00021 | 503 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 473 | - | - | |
Stsc30270g00021 | 503 | ProSiteProfiles | Protein kinase domain profile. | 193 | 476 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30270g00021 | 503 | SUPERFAMILY | Protein kinase-like (PK-like) | 172 | 462 | IPR011009 | - | |
Stsc30270g00021 | 503 | ProSitePatterns | Protein kinases ATP-binding region signature. | 199 | 221 | IPR017441 | GO:0005524 | |
Stsc30270g00021 | 503 | FunFam | serine/threonine-protein kinase PBS1-like | 161 | 267 | - | - | |
Stsc30270g00021 | 503 | Pfam | Protein tyrosine and serine/threonine kinase | 194 | 460 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30270g00021 | 503 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 165 | 478 | IPR045874 | GO:0004672 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30270g00021 | Stsc-Chr30270 | 146375 | 148142 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30270g00021 | 173 | 474 | Receptor kinase-like Gene Family | AT1G66910 | 47.742 | 8.08e-99 | 310 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Stsc30270g00021 | PK_Tyr_Ser-Thr | 3.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30270g00021 | - | - | ahf:112805998 | 759.985 |