Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30268g00017 | ATGAAATTATCTCCCCTCCTAACGGTAACACTGAGTACCCATCCTCTTGGGTGTCAAGTTCTGGCCACTTTGCATTCGGCTTTTACCCTCACGGTTGGCTACGCCATTGGAATATGGCTCAAGTCCGGTGATGGAAACATGACAGTTGTATGGACCGCTAAACGTGACGACCCTCCAATCTCATCTAACTCCACCTTGGAATTAACCGTGGATGGCCTACTTCTCAAGCAAGGGAGTGATGTCCAAGGACAGGTGTATGTGGATACAGAGCCAGCCGGTTTTGCATCCATGCTTAATTCCGGTAACTTTGTGATCTATGCTCAAGAAAGTTCTTCTCCTGTGGCTGTGCCTGTGTGGCAAAGCTTTCATCACCCAACTGACACCATATTAGGAGGCCAGAATTTAACTATTCGGAACCAGCTTGTCTCTAGCATGTCCACTTCAGATCGTTCCACTGGACACTACTTTCTTGCCTTTCAGCGTGATAACGACCTTGTTGCTTATCCCATCAATAGCTCCGCTCAATCTCTTGATGCTTACTGGGCTTCCATTTCCATGAATCTGTACGGGGTGGAACAGTTGAATCTTGACACTGAAGGCAATCTTTGCTTCGACCATGTCTTGCCATGCTTGGTTAATAACAGTAACCACCAAAACCAGCCGCAGAACACTAGTTCTATCTACCGCGCAACTCTTGATGTTGATGGAAACCTGAGATTGTATGAGCACCTATTTGAGGATAAGGAGGGAATTGATATTACAATTTTGTGGAAAGCTAGGAGTGATGAATGCCAAATCAAGGGGTTTTGTGGCATCAACAGTTACTGCTCCAACACAAATGGCAATGCTAGATGCCAGTGTTATCCTGGTTTCGTCCCCTGCAACAACGAAACCACTGGTCGTAATGCCATGTTTCTGGAGTGCAAACTCAACTACAGCAAAGATGATTGCGAAAGGAGTGGTGACCGAAACTTTTTGTTGTATAACATTGTTTCTTTGGAGGAGATGTGGTGGGATGGATACCCATATTGGGCTAAACAGATGAGCATGGGAGCTTGTGAAAAGTCTTGCAAGACAGATTGTGATTGTGGAGCAGCATTATACACAAATGGCCAATGCAACAAATATAGTCTTCCACTCAGATATGGCAGCAAGGCTTCAAATGAATTAGACACAGGGATGGCACTTTTCAAGGTGCCTTCGGGATATGTCTTCAGGGGAAACACTACCACCTCATCTCCCAAGAAACCTAATGCCATTGATAATAACCGGAAAGGTCTGATACTGATTCTAGCCTCTACTTTGGGTTCCATCTCATTTCTCTGTGTGGTCTTTGTTGTGTCTATTTTCTTCACTTATAGGAGCCAAGTTCATAGACTTGCAAAGCTGTCTGCCAGTTCCAAGCTGGGATTCACTGAGGAATGTTCGTTACGCTCGTTTTCCTTTGATGAACTTGTGAAAGCAACTAATGGGTTCACAGAGGAGGTAGGCAGAGGATCTTTCGGAGCAGTTTATAGGGGCACAATAGGAGAGAATAACAGAATAAGGATTGCTGTCAAGCGAATGGAGAGGATTGTTGATGAGGGGGAGAGGGAATTCAGAGCTGAAATTACTGCCATTGCTCGAACTCATCATAGGAATCTGGTTAAGCTCGTGGGCTTTTGTATTGAGGGGTCAAGGAAGCTTCTTGTTTATGAATATGTCAGCAATGGATCTCTGGCGAATCTTCTCTTCAAGACTAAGAAGCATCTTCCATTGAAAGAGAGACTAAAAATTGCATTGGATGTGGCCAGAGGAGTCCAGTATCTACATGAAGAATGTGAAGTTTGTATTGCCCATTGTAATCTGAAGCCTCAAAATATACTAATGGATGAATTACTGACAGCTAAGCTATCTGATTTCGGATTGGCAAGGCTATCAAAGCCGGAATTTTCGAGAAATAGAGCAGACAAGGAGGTTACAACAGGCTACTTAGCACCTGAATGGCAAAAGGAGGCATTGGTATCAATTAAAGCTGATGTTTTCAGTTATGGGATAGTACTGTTGGAGATTGTATGCCGCAGAAGGAATATTGAAGTAAATGTTCCATCACCAGAGGAGGTGCTTCTTTCTACTTGGGCATATCATTGCTTTGCAACTGAGCAGTTACATGATCTTGTGGTTGTGGCTTACCAAGAGGAAGATATGGATTGGAAAACACTGGAACGAATGCTCAAGGTGGGGCTGTTGTGTGTCCAAGACTACCCATCTCTACGTCCTTCAATGAGGGATGTTATTTTGATGTTGGAAGGATGGAAACATATTCCAATTCCCCCATCGCCATCCCCATCCCGCTAG | 2337 | 0.4424 | MKLSPLLTVTLSTHPLGCQVLATLHSAFTLTVGYAIGIWLKSGDGNMTVVWTAKRDDPPISSNSTLELTVDGLLLKQGSDVQGQVYVDTEPAGFASMLNSGNFVIYAQESSSPVAVPVWQSFHHPTDTILGGQNLTIRNQLVSSMSTSDRSTGHYFLAFQRDNDLVAYPINSSAQSLDAYWASISMNLYGVEQLNLDTEGNLCFDHVLPCLVNNSNHQNQPQNTSSIYRATLDVDGNLRLYEHLFEDKEGIDITILWKARSDECQIKGFCGINSYCSNTNGNARCQCYPGFVPCNNETTGRNAMFLECKLNYSKDDCERSGDRNFLLYNIVSLEEMWWDGYPYWAKQMSMGACEKSCKTDCDCGAALYTNGQCNKYSLPLRYGSKASNELDTGMALFKVPSGYVFRGNTTTSSPKKPNAIDNNRKGLILILASTLGSISFLCVVFVVSIFFTYRSQVHRLAKLSASSKLGFTEECSLRSFSFDELVKATNGFTEEVGRGSFGAVYRGTIGENNRIRIAVKRMERIVDEGEREFRAEITAIARTHHRNLVKLVGFCIEGSRKLLVYEYVSNGSLANLLFKTKKHLPLKERLKIALDVARGVQYLHEECEVCIAHCNLKPQNILMDELLTAKLSDFGLARLSKPEFSRNRADKEVTTGYLAPEWQKEALVSIKADVFSYGIVLLEIVCRRRNIEVNVPSPEEVLLSTWAYHCFATEQLHDLVVVAYQEEDMDWKTLERMLKVGLLCVQDYPSLRPSMRDVILMLEGWKHIPIPPSPSPSR | 778 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30268g00017 | 778 | Gene3D | Phosphorylase Kinase; domain 1 | 453 | 567 | - | - | |
Stsc30268g00017 | 778 | Pfam | Protein tyrosine and serine/threonine kinase | 492 | 759 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30268g00017 | 778 | Gene3D | Transferase(Phosphotransferase) domain 1 | 568 | 768 | - | - | |
Stsc30268g00017 | 778 | FunFam | S-receptor-like serine/threonine-protein kinase | 460 | 567 | - | - | |
Stsc30268g00017 | 778 | Pfam | S-locus glycoprotein domain | 221 | 293 | IPR000858 | GO:0048544 | |
Stsc30268g00017 | 778 | FunFam | Serine/threonine-protein kinase | 125 | 252 | - | - | |
Stsc30268g00017 | 778 | Pfam | D-mannose binding lectin | 48 | 140 | IPR001480 | - | |
Stsc30268g00017 | 778 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 48 | 183 | IPR036426 | - | |
Stsc30268g00017 | 778 | SUPERFAMILY | Protein kinase-like (PK-like) | 473 | 766 | IPR011009 | - | |
Stsc30268g00017 | 778 | CDD | EGF_CA | 262 | 291 | - | - | |
Stsc30268g00017 | 778 | SUPERFAMILY | Growth factor receptor domain | 267 | 411 | IPR009030 | - | |
Stsc30268g00017 | 778 | PIRSF | SRK | 24 | 778 | IPR024171 | GO:0004674 | |
Stsc30268g00017 | 778 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 29 | 774 | - | - | |
Stsc30268g00017 | 778 | ProSiteProfiles | Protein kinase domain profile. | 490 | 770 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30268g00017 | 778 | Gene3D | - | 126 | 265 | IPR036426 | - | |
Stsc30268g00017 | 778 | FunFam | Putative receptor-like protein kinase | 568 | 769 | - | - | |
Stsc30268g00017 | 778 | ProSitePatterns | Protein kinases ATP-binding region signature. | 496 | 520 | IPR017441 | GO:0005524 | |
Stsc30268g00017 | 778 | ProSiteProfiles | EGF-like domain profile. | 260 | 295 | IPR000742 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30268g00017 | Stsc-Chr30268 | 86458 | 88898 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30268g00017 | 402 | 769 | Receptor kinase-like Gene Family | AT4G29050 | 33.596 | 2.20e-58 | 209 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Stsc30268g00017 | PK_Tyr_Ser-Thr | 3.7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30268g00017 | - | - | adu:107471486 | 845.499 |