Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30268g00014 ATGAATACGATTCCTGCAAGCAGGACAACAGAAACACATGTACCAGTTACAAACATAACTCCCGGTTCCTCACTTTACCCTGCTATTAACCCTACTCACTGGTCTTCTTCTTCTGGCCAATTCGCATTCGGCTTTTATAAGCAAGGCAGTGGCTATGCCGTTGGAATCTGGTTGGTCGGGGCTGGTGCTGGTGCCAAGAACAACACGGTTGTATGGACTGCAAACCGAGACGATCCACTGGTTACTTCAAATGCAAGTCTTCAGCTGACTGCACAAGGTAAATTAGTAGTTCAAATAGAGCAAGGAAAAGAGAAGATTATTGCTGATGCAACTGCTTCCTCTGCATCCATGCTGGATTCTGGAAACTTTGTGCTTTATAACCAGACTAATGGTGTCATATGGCAGAGTTTTGATTACCCAACTGACACTATGTTAGGTGGTCAATCTCTACCTTGTGGAGCTGAACTGTTGTCTAGTTCTTCAGATACCAATCACTCAAGTGGACGATTTCGTCTCAAGATGCAGGATGATGGAAAGTTTGGTCTGTATCCAGCATTCACAACAAACACAACAAGGGATGCTTACTGGCCATCAGATTCAGATTCTCCATCGTATGATGATAAAATACTCCAAGGCAAAGGCAAAGCTCATCTTTACCTCAACAATACAGGCTTGCTGGTGTCCAAGAATGACAGCAATAGTGTTATTTGGAGCTATTATGGGGCTTCTTCTATGGATAGCATCGGAAACAACCACATTATTTATCGTGCAACCCTGGACCCGGACGGGGTTCTGAGGGTGTATGGTCATGACAAAGGTGGTGAGTTCAAAAAAGTCTCACAGTGGCCACTGTACAATGGATGTGAAGTAAAGGGCTACTGTGGCTTTAACAGCTACTGTACATTCAACGATGACAAACCATACTGCTACTGTCTTGAAGGTTTTGAGTTTGTAGAGGCAGATGAACCCACTCTTGGTTGCAAAAGGAACTTCTCAATAGCAGAGTGTAGTGGTGCAGCCTATTATAACATGGTCACCATGCTAGATATTCAATGGGAGGATCACTCTTATTTCGGTGGTGAAATGAAGCATGAAGAACAATGCTCAGATTCTTGTTTGCATGATTGCAACTGTTGGGGTGCCCTTTATGAGAATGGGTACTGTGTGAAACAAGGGATACCTTTCAGATATGTCTCAAGAAGAGTTGAAGGGTTCTCAGCCAATACAATGTTCTTAAAGGTGGGAAATATCACCCATGAAAACAAGAATCCCAATGATATAACAAATACAATCCCTCTCTCTATCAGGAGTACCAGTAACAAAGCAGTTGTTACTATCATTGTCATCACATCCGTGTTCACTCTTCTTTTATGCTCAATGATAGCCATCTCTTGCCACCTGATTTACAAGATTCGAGTTCTAAGGCTCCAGAGGCAGATGGAGACTGGCAACTTGGGCCTAAATGAAGAGGTGGCATTAGGAAGATTTTGTTACAGTGAACTCAAGAGGGCAACAAATGGTTTCAAGCAAGAGCTGGGTAAGGGTTCTTTTGGAGCAGTCTACAAAGGCAGCTTATACAAAAGTAGAAGATCCATTGCAGTGAAGAGACTAGAGAAGCTAGTTGAAGAAGGAGAAAGAGAGTTCCAAGCAGAGGTGAGAGCCATTGGAAAAACACATCACAGGAACCTTGTTCGCTTGCTGGGATTTTGTGCTGAGGGTCCTAAAAGGCTTCTGGTGTATGAATACATGAGCAATGGTTCCCTTGGGAAGCTTCTCTTTGGCAATGAAAGGCATCCACATTGGGATGAGAGAGTGAGAATAGCACTGGATATTGCAAGAGGGATCCTCTATCTGCATGAAGAATGTGAGGCTCCTATCATTCACTGTGACATAAAGCCTCAAAATATCTTGATGGATGAGTTCTGGACTGCCAAAATATCTGATTTCGGGTTAGCAAAGCTTCTCATGCCGGATCAAACAAGAACCTTCACAGGAGTTAGAGGGACAAGAGGGTATGTGGCTCCAGAATGGCAGAAGAACATCCCAATATCAGTGAAGGCAGATGTTTACAGCTATGGTGTTGTGCTGCTGGAAGTTATATGCTGCAGAAGGAACCTGGAAGTTAGTGTTTCTGTACCAGAGGAGATTCTTCTCTCTGGCTGGACCTACAAGTGCTTTGTTGCTAAAGAGTTGCATAAGCTAGTTCATTGGGAAATAGTGGATAAGAATGTTTTGGAAAATATGGTGAAGGTGGCACTGTGGTGTATCCAAGAAGAGCCTGCTCTCCGGCCAACAATGAAGAGTGTGGTGTTGATGTTAGAAGGGGTTACTGATGTAGCTATCCCTCCATGTCCAACAACCTCTATTTCTATGTAA 2376 0.4352 MNTIPASRTTETHVPVTNITPGSSLYPAINPTHWSSSSGQFAFGFYKQGSGYAVGIWLVGAGAGAKNNTVVWTANRDDPLVTSNASLQLTAQGKLVVQIEQGKEKIIADATASSASMLDSGNFVLYNQTNGVIWQSFDYPTDTMLGGQSLPCGAELLSSSSDTNHSSGRFRLKMQDDGKFGLYPAFTTNTTRDAYWPSDSDSPSYDDKILQGKGKAHLYLNNTGLLVSKNDSNSVIWSYYGASSMDSIGNNHIIYRATLDPDGVLRVYGHDKGGEFKKVSQWPLYNGCEVKGYCGFNSYCTFNDDKPYCYCLEGFEFVEADEPTLGCKRNFSIAECSGAAYYNMVTMLDIQWEDHSYFGGEMKHEEQCSDSCLHDCNCWGALYENGYCVKQGIPFRYVSRRVEGFSANTMFLKVGNITHENKNPNDITNTIPLSIRSTSNKAVVTIIVITSVFTLLLCSMIAISCHLIYKIRVLRLQRQMETGNLGLNEEVALGRFCYSELKRATNGFKQELGKGSFGAVYKGSLYKSRRSIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLLFGNERHPHWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYVAPEWQKNIPISVKADVYSYGVVLLEVICCRRNLEVSVSVPEEILLSGWTYKCFVAKELHKLVHWEIVDKNVLENMVKVALWCIQEEPALRPTMKSVVLMLEGVTDVAIPPCPTTSISM 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30268g00014 791 ProSitePatterns Protein kinases ATP-binding region signature. 512 535 IPR017441 GO:0005524
Stsc30268g00014 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 199 IPR036426 -
Stsc30268g00014 791 SMART serkin_6 506 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30268g00014 791 Gene3D - 16 139 IPR036426 -
Stsc30268g00014 791 CDD B_lectin 35 140 IPR001480 -
Stsc30268g00014 791 Pfam S-locus glycoprotein domain 249 316 IPR000858 GO:0048544
Stsc30268g00014 791 SUPERFAMILY Protein kinase-like (PK-like) 493 774 IPR011009 -
Stsc30268g00014 791 Gene3D Transferase(Phosphotransferase) domain 1 583 780 - -
Stsc30268g00014 791 ProSiteProfiles Bulb-type lectin domain profile. 16 138 IPR001480 -
Stsc30268g00014 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Stsc30268g00014 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 162 270 IPR036426 -
Stsc30268g00014 791 FunFam S-receptor-like serine/threonine-protein kinase 476 582 - -
Stsc30268g00014 791 Pfam D-mannose binding lectin 69 150 IPR001480 -
Stsc30268g00014 791 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 785 - -
Stsc30268g00014 791 ProSiteProfiles Protein kinase domain profile. 506 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30268g00014 791 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 781 - -
Stsc30268g00014 791 SMART blect_4 25 140 IPR001480 -
Stsc30268g00014 791 FunFam Serine/threonine-protein kinase 140 283 - -
Stsc30268g00014 791 PIRSF SRK 3 791 IPR024171 GO:0004674
Stsc30268g00014 791 Gene3D - 141 275 IPR036426 -
Stsc30268g00014 791 Coils Coil 534 554 - -
Stsc30268g00014 791 ProSiteProfiles Bulb-type lectin domain profile. 141 280 IPR001480 -
Stsc30268g00014 791 Pfam Protein kinase domain 509 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30268g00014 791 Gene3D Phosphorylase Kinase; domain 1 472 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30268g00014 Stsc-Chr30268 72394 74814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30268g00014 478 785 Receptor kinase-like Gene Family AT5G38280 43.218 8.10e-66 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc30268g00014 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30268g00014 - - gmx:100815958 917.146