LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc30268g00012	ATGGATGCCATATTGAGCTTCCTAATTATGTTTATGATGATGACTTTGGCAGTAGTTCAAGCCCAACTAAGATACGGGTTTTATTTTAGTTCATGCCCAAGTGCTGAGGCCATTGTACGGTCTACTGTTGAATCTCACTTCAACAAAGATCCTACCATTGCTCCTGGCCTTCTCAGGCTTCATTTCCATGACTGCTTTGTACAGGGGTGCGATGGTTCAATCTTGATTGCAGGATCTTCTGCAGAGAGGAATGCAGTGCAAAACATTGGTCTAAGAGGTTTTGAAGTCATTGATGATGCAAAATCACAGATAGAAGCAGCATGCCCTGGAGTTGTCTCATGTGCTGACATTCTAGCATTGGCAGCAAGGGATGCTGTCCATTTGAGTGATGGTCCAAGTTGGCTAGTACCAACAGGAAGAAGAGATGGGAGGATTTCTTCATCAACTCAAGCCTCAAACATGCCTTCTCCACTTGATTCAGTTCCTGTCCAGAAGCAAAAGTTTTCCTCCAAAGGTCTAGATGATCATGACCTTGTCACCTTATTAGGTGCACACACCATAGGGCAAACAGACTGCAGGTTCTTCAGTTACCGTTTATACAATTTTACCACCACTGGGAACGCTGATCCCACCATAAACCAGTCTTTCTTGAATCTGCTACAAGCTCAGTGTCCCAAAAATGGAGATGGTTTGAGAAAGGTGGCATTGGACAAAGATAGTCCTGCTAAGTTTGATGTGAGTTACTTCAAGAACGTGCGTGATGGTAGTGGTGTTCTAGAGTCAGATCAGAGGCTGTGGGAAGATGCAGGTACAAAAAGTGTGGTGCAGAATTATGCTGGGAACATTAGAGGGATATTGGGATTAAGATTTGAATTTGAGTTTCCTAAGGCCATGATCAAGTTGAGTAGCATTGAAGTTAAGATTGGAACTGAAGGAGAAATCAGAAAAGTGTGCTCTAAATTTAATTGA	969	0.4283	MDAILSFLIMFMMMTLAVVQAQLRYGFYFSSCPSAEAIVRSTVESHFNKDPTIAPGLLRLHFHDCFVQGCDGSILIAGSSAERNAVQNIGLRGFEVIDDAKSQIEAACPGVVSCADILALAARDAVHLSDGPSWLVPTGRRDGRISSSTQASNMPSPLDSVPVQKQKFSSKGLDDHDLVTLLGAHTIGQTDCRFFSYRLYNFTTTGNADPTINQSFLNLLQAQCPKNGDGLRKVALDKDSPAKFDVSYFKNVRDGSGVLESDQRLWEDAGTKSVVQNYAGNIRGILGLRFEFEFPKAMIKLSSIEVKIGTEGEIRKVCSKFN	322

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc30268g00012	322	MobiDBLite	consensus disorder prediction	139	161	-	-
	Stsc30268g00012	322	MobiDBLite	consensus disorder prediction	142	161	-	-
	Stsc30268g00012	322	Pfam	Peroxidase	39	280	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc30268g00012	322	FunFam	Peroxidase	155	301	-	-
	Stsc30268g00012	322	PRINTS	Haem peroxidase superfamily signature	130	142	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc30268g00012	322	PRINTS	Haem peroxidase superfamily signature	112	129	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc30268g00012	322	PRINTS	Haem peroxidase superfamily signature	177	192	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc30268g00012	322	PRINTS	Haem peroxidase superfamily signature	237	252	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc30268g00012	322	PRINTS	Haem peroxidase superfamily signature	54	68	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc30268g00012	322	FunFam	Peroxidase	26	167	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc30268g00012	Stsc-Chr30268	61882	63369	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc30268g00012	9	322	Peroxidase	AT2G41480	70.755	1.38e-171	477

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc30268g00012	K00430		-	gmx:100816487	543.117

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