Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30267g00015 ATGGATAAAAGAAGGTTATTTGTTGCTATATTTATCGATGAGGATAAGGTCAGATGTGCTGGACCCGGTGAAAATTTAAGGATTAGATTATCTGGTGTTGAAGAAGAAGAGATATCAAGTGGGTTTGTCCTATCAAGTGTTGCAAATTCAATACCAGCTGTTACTGAGTTTGTTGCTCAATTGGCAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCGGGGTACAAGGCTGTTTTGCACATCCACTCTGTTGTTGAAGAATGTGAGATTATTGAGCTCTTACATCAAATTGATCCAAAAACAAGGAAACCTATGAAAAAGAAGGTTCTGTTTGTGAAGAACGGTGCTAATGTTGTGTGTCGAATTCAGGTTAATAGCATGATATGCGTTGAGAAGTTCTCTGATTTCCCACAACTTGGGAGATTTACTCTTCGCAGTGAAGGAAAAACTGTTGCTGTGGGGAAGGTTACTGCTCTGTAA 483 0.3892 MDKRRLFVAIFIDEDKVRCAGPGENLRIRLSGVEEEEISSGFVLSSVANSIPAVTEFVAQLAILELLDNAIFTAGYKAVLHIHSVVEECEIIELLHQIDPKTRKPMKKKVLFVKNGANVVCRIQVNSMICVEKFSDFPQLGRFTLRSEGKTVAVGKVTAL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30267g00015 160 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 54 159 IPR009001 -
Stsc30267g00015 160 PANTHER TRANSLATION FACTOR 9 159 - -
Stsc30267g00015 160 FunFam Putative translation elongation/initiation factor family protein 52 160 - -
Stsc30267g00015 160 CDD eRF3_C_III 52 160 - -
Stsc30267g00015 160 Pfam Elongation factor Tu C-terminal domain 51 159 IPR004160 -
Stsc30267g00015 160 Gene3D Translation factors 53 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30267g00015 Stsc-Chr30267 95056 136160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30267g00015 12 158 Eukaryotic Initiation Factors Gene Family AT5G10630 30.201 2.25e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30267g00015 K03267 - gmx:100784412 266.159