Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30266g00032 ATGTCAACTTCATCACTCACCGATTCCTCTTCCTTTTGCTATGTATTCACCTATGATGTGTTTATCAGCTTTAGAGGCACTGATACTCGCTATGGTTTCACTAACAATCTCTACCAAGCTCTCCATAGAAAGGGAATCCACACCTTCTTTGACGATGAAGAGCTTCGGAATGGAGAGGAGATCACACCCACTCTTCTCAAGGCAATTGAAGGATCTAGAATTGCCATTGTTGTGTTCTCCAAGAACTATGCATCTTCTTCCTTTTGCCTAGATGAACTTGCTAAGATCATGGAGTGCGTTAAGGGGAATGGCCGGTGGGTCTTTCCAGTCTTTTATGATGTTGATCCTAGTGATGTGCGTCACCAAAAAGGAAGCTACAGAGAAGCGTTGACTAAGCATGAGGAGAGGTTCAAAGATGATAAGGACAAAGTGCACAAATGGAGGTCAGCTCTGCGTCAAGCGGCTAACCTGTCCGGCAGTGATTTCAAACTAGAAAGGGAATATGAACATGCTTTTATTGAGAAGATTGTGAAGGAAATCTCAAATAGAATCAGTCGTGTTCCCTTGAATGTTGCCGATTACCCTGTTGGACTAGAATCTCGAGTACCAGAAGTAAACAAGCTTCTAAATGGTGGATCTAAAAGTGGAGCCCATATGGTTGGAATATATGGAGTTGGTGGAATAGGTAAAACAACTCTTGCTAAAGCAGTTTATAACTTGATTGCTGACCAATTTGAAGGTTTGTGTTTTCTCGAAAATGTGAGGGAAAATTCAATTAGACATGGTTTAGCATATCTTCAAGAGTTATTTCTTTCAAAAACACTTGGAGAGAAAGATATAAAGCTAGCAAGTGAAAGTGAAGGAATTTCATTAATAAAGCAAAGGTTCAAGAGCAAGAAGATTCTCTTGGTTCTTGATGATGTTGACAAACTTGAGCAATTGCAAGCAATTGCTGGAAGGCCCGATTGGTTTGGTTCTGGCAGCATAATCATCATAACAACTCGGGACAATCATTTGTTGGGAAGTCTTATGGTGGAGAAATCATATCAAGTGAAGGAATTTGATGATAAAGAAGCACTTGAGTTACTTAGGTGGAATGCTTTCAAACATGAAAATGTTGATCCAAGCTATATGGATATTTTAAATGAAGTAGTGTCATATGCTTCTGGCATTCCATTGGTTCTGGTGGTAATAGGGTCAAATTTATATGGAAGAAGTGCAGAACAATGGATATCTGCAATAGAGGAGTATAAAAAAATTCCTAATAAAGATATCCAAAAGATACTTAAAGTAAGCTTTGATGCTTTGGGGGAATATCATCGAATTATTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATAGTTTGGCAGAGCTTGAAAACATTCTCCACGCTCATCATGATGTTAGCCCGAAATTTGCTATTCATGTGTTGATTGAAAGGTCACTAATAAAGATAGATGATTTTGGTTATGTGACACAACATGACTTGATACAAGACATGGGCCGAGAAGTTTTTCGTCAACAATCACCAAACAATCCTGGTAAACGTAGTCGATTATGGATTCCTGAAGAAGTTATGCAAGTTTTACAACAGAACATTGGAACAAATAATATCGAACTCATATTTCTGGAAGCTCCCATGTCTAAAGTAATTGAATGGGATGGAGAAGCCTTCAGAAAGATGAAAAACCTCAGAACTCTTATTATTAAAAGTGGCAATTTTTTCAATGGTCCCAATCATCTTCCAGACAGTTTAAGAGTATTAGAATGGCGGGGATATCCTTCACATTCTTTACCAGTTGATTTTCATCCAAAGAAGCTTTCCATACTCAAGTTGCCCAACAATTGCTTTACACCACTGCCGTTAGTTAAGCTATTAAAGGAATTTGTGGACCTGAGTGTTTTGGATTTTAGTTGGAATGATTGGATAACAAATATACCTGATGTTTCAAGTGCCCCAAATTTAAAAGAATTATGCTTTGCATGTTGTGAGAATTTAGTTAAAATTGACGAGTCAGTTGGTGTTTTGGGTAAGCTTACAGTATTGGAAGCTCATGGTTGTACAAAGCTTAGAAGTCTTCCTTCCCTTAAGTTACCTTCTCTTAGCAGACTCACTCTTGCGAACTGTTATAGTCTTGAGACTTTCCCTGAAATATTAGGAAAGATGGAAAATATAACATATCTTGACTTGTACGAAACTTCCATAAGTGAATTGCCCAATTCCATTTGTAATCTTACTCGGCTTTATGAGTTGAATCTGCGTGATGGTGGAACTATTGTGTTGCCGAGTAGCATTTTTATGTTGGGAGAACTCGAAAAGTTGGAATTTCTGCGATGTAAGGATTTGCTATTATCTGATGAAGAAGGTGTAGAGCAAGTGAGCACAGCATCCTTATCAACCGCAACATATCTTGATTTGTCTTCATGCAATCTGTCAGATAAGTTCTTTGGAATATTTCTTGCTCGGTTTCCCAATGTGCAAGAGTTGAATTTGTCGGGTTGTAATTTCACAATTCTTCCAGCATGCATAGAGAATTGTCAAGCTTTGAGGTTTCTTTATCTTCCTGACTGCAAGAACCTTCAAGAGATAAGAGGGATTCCACCCAACATACAAAGTTTGGATGCAGCTGGCACCACATCATTGAGTTGTTCTAGTAGAGGGCTATTATTGAATGAGAAACTGCATGAGGAGGTTGGAAAGAAGAAATTTATCTTGCCAGGAACTAGTATTCCAAGTTGGTTTGAGCATCAGAGCAGTGGACAACCAATTTCTTTCTGGTTTCGTAATCAGTTTCCCGCCATGTCTCTATGTTTTCTTTTCAAGGATCAGGCTGATGATAAATGTTCTATTAGCCCTCATTTGAAATTGGTCCCCAGTAGTGGCGATCAGAATGGTTGGCACATATTTCGTGATCAAGTTGACACGTATAGGAAGAGTCACATACATATTTATGATTTACAAGATAATGGGGGCCAACAGTTTCAACAAAATGAATGGAATCAAGCGCTGGTCTCTCTTTCACGTGATTATGGTGAAAGCCAACTCAGTCCAGAGGAATGGGGCAACATAGAGATTGGAGTGCATATAATCAAAGAAAGAAGTAGCATGAGTGATATAAAATTCACTGATCCGCTGTTGACAAAAGAAGATCACATACCATTGGGCATGGCCATGGACATGGGAGATTCTCACACTCACCATATTAGTGAGCAACAAAGCGGAGTGCTGGAATTTTCATTTGAATTATCACTTCCATCTCCACCTCCATTGAGTGATAATTTGCTTTGGGGTCCGCTTAGGGCCTTCCCTGGACGAGGTTACTTCGCACCAAATGCATCTAGGTTTCAGTATTTGAAATCTGACTCTCTAAACGCTAATATAACAGAAAAGGCTCCAGGTGAATCTTCTAATATAACATGTTGTGGCGAGGCTAGAGAAGAAGAATTACATCCAATATCCACATGCGTTTCGGCGTGGTCAACATCAACTAACAACTATTTGAGCAATGAAAATGAAGTGATGAGTGATGATGACGATGATGATGTAGAAATAGATGCATTTTATGCTTCTCTTGGTGTTGCTAGCATCCCTATGCTTTCTCGTTCCCATGAGAAGTTGTTTACCGCTACTCCAAGTGATGAAGAAACTAGGAAAGCTTTTAAATATGTACAAGACTTCCTCTCCAACGATGCTTCAGTTTTGTTGTATCCGGAATTGTGCAGTATCTTGAAAGCCAACCTAGATTACCTCTCCAAGTTATCCGCAGATAATGGCAGCATATCAACAGAAATGAGTAAAGTGATATCAGAAGCTTCACAGTTTTTGACTCATTGGAGTAGGGACTATAGTGAAGCACACACCAAAATTGATTCTATAATGTCTCAATTGCAGAGAGCTGATGAATTGGAAATGAGTCTGGAAAGTAACAAGAAAAGGTATTTGGAAATTGTGGCCTCTCGTAAGAGAAAGAGAGAGGTTTTTGAGGAAGGAAAGACAATTAAAACTGAATTGGATGAGTTAAGGAAGAATGTGCCACAATGGGAACATGAGCACACTTTGGCAAAGAAAACTCAGGCAACTATCATAGCTGAATGGTCAAGGCTTCGAGAAACTTTTCAGAATATTGAGAAAGAATGGAACTTATAA 4149 0.3885 MSTSSLTDSSSFCYVFTYDVFISFRGTDTRYGFTNNLYQALHRKGIHTFFDDEELRNGEEITPTLLKAIEGSRIAIVVFSKNYASSSFCLDELAKIMECVKGNGRWVFPVFYDVDPSDVRHQKGSYREALTKHEERFKDDKDKVHKWRSALRQAANLSGSDFKLEREYEHAFIEKIVKEISNRISRVPLNVADYPVGLESRVPEVNKLLNGGSKSGAHMVGIYGVGGIGKTTLAKAVYNLIADQFEGLCFLENVRENSIRHGLAYLQELFLSKTLGEKDIKLASESEGISLIKQRFKSKKILLVLDDVDKLEQLQAIAGRPDWFGSGSIIIITTRDNHLLGSLMVEKSYQVKEFDDKEALELLRWNAFKHENVDPSYMDILNEVVSYASGIPLVLVVIGSNLYGRSAEQWISAIEEYKKIPNKDIQKILKVSFDALGEYHRIIFLDIACCFKGYSLAELENILHAHHDVSPKFAIHVLIERSLIKIDDFGYVTQHDLIQDMGREVFRQQSPNNPGKRSRLWIPEEVMQVLQQNIGTNNIELIFLEAPMSKVIEWDGEAFRKMKNLRTLIIKSGNFFNGPNHLPDSLRVLEWRGYPSHSLPVDFHPKKLSILKLPNNCFTPLPLVKLLKEFVDLSVLDFSWNDWITNIPDVSSAPNLKELCFACCENLVKIDESVGVLGKLTVLEAHGCTKLRSLPSLKLPSLSRLTLANCYSLETFPEILGKMENITYLDLYETSISELPNSICNLTRLYELNLRDGGTIVLPSSIFMLGELEKLEFLRCKDLLLSDEEGVEQVSTASLSTATYLDLSSCNLSDKFFGIFLARFPNVQELNLSGCNFTILPACIENCQALRFLYLPDCKNLQEIRGIPPNIQSLDAAGTTSLSCSSRGLLLNEKLHEEVGKKKFILPGTSIPSWFEHQSSGQPISFWFRNQFPAMSLCFLFKDQADDKCSISPHLKLVPSSGDQNGWHIFRDQVDTYRKSHIHIYDLQDNGGQQFQQNEWNQALVSLSRDYGESQLSPEEWGNIEIGVHIIKERSSMSDIKFTDPLLTKEDHIPLGMAMDMGDSHTHHISEQQSGVLEFSFELSLPSPPPLSDNLLWGPLRAFPGRGYFAPNASRFQYLKSDSLNANITEKAPGESSNITCCGEAREEELHPISTCVSAWSTSTNNYLSNENEVMSDDDDDDVEIDAFYASLGVASIPMLSRSHEKLFTATPSDEETRKAFKYVQDFLSNDASVLLYPELCSILKANLDYLSKLSADNGSISTEMSKVISEASQFLTHWSRDYSEAHTKIDSIMSQLQRADELEMSLESNKKRYLEIVASRKRKREVFEEGKTIKTELDELRKNVPQWEHEHTLAKKTQATIIAEWSRLRETFQNIEKEWNL 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30266g00032 1382 PRINTS Disease resistance protein signature 697 713 - -
Stsc30266g00032 1382 PRINTS Disease resistance protein signature 295 309 - -
Stsc30266g00032 1382 PRINTS Disease resistance protein signature 219 234 - -
Stsc30266g00032 1382 PRINTS Disease resistance protein signature 388 402 - -
Stsc30266g00032 1382 SUPERFAMILY "Winged helix" DNA-binding domain 424 531 IPR036390 -
Stsc30266g00032 1382 SMART till_3 17 157 IPR000157 GO:0007165
Stsc30266g00032 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Stsc30266g00032 1382 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 186 - -
Stsc30266g00032 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 783 IPR044974 GO:0006952
Stsc30266g00032 1382 Gene3D Ribonuclease Inhibitor 527 788 IPR032675 -
Stsc30266g00032 1382 SMART AAA_5 216 358 IPR003593 GO:0016887
Stsc30266g00032 1382 Gene3D - 16 185 IPR035897 -
Stsc30266g00032 1382 SUPERFAMILY L domain-like 544 888 - -
Stsc30266g00032 1382 Pfam NB-ARC domain 202 435 IPR002182 GO:0043531
Stsc30266g00032 1382 Pfam TIR domain 18 184 IPR000157 GO:0007165
Stsc30266g00032 1382 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 159 IPR035897 -
Stsc30266g00032 1382 Gene3D - 354 437 IPR042197 -
Stsc30266g00032 1382 Gene3D Ribonuclease Inhibitor 789 889 IPR032675 -
Stsc30266g00032 1382 Gene3D - 186 351 IPR027417 -
Stsc30266g00032 1382 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30266g00032 Stsc-Chr30266 149273 154337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30266g00032 18 783 WRKY Transcription Factor Family AT4G12020 30.584 7.26e-77 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30266g00032 - - ahf:112801816 1881.3