Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30266g00026 ATGGTGGGTGAATGGACGTACGATGTGTTCCTAAGTTTCAGAGGCAAAGATATTCGCCAACATTTTATTGGTCATCTTTATGAAGGTCTCCGTGGAAGAGGAATACACACCTTCCTGGACGATGAGGAGCTCGAGAGAGGGGATGACATCACACGCTCGCTTCTCACGGCCATTCAGCACTCAATGATCGCCATCCCTGTCTTCTCTCTCAACTATGCAACTTCATCTTTCTGCTTGGATGAACTTGTCAACATCATGGACTGTGCTGATCAGATTGTTTTGCCGGTCTTTTACGAGGTTGACCCTTTCCATGTGCGCCATTTGAGAGGGACCTATGGAGAAGCTTTGGCTATGCACGAGGAGAGGTTCAAGAGTGGCGAAGAAGGAAGTTATATGGTGAAAAACATGCAGAAATTGGAGAAATGGAAGACGGCTCTTAAGCGAGCTGCAAACTTATCCGGTTACCATTTCAAAATTGGGTGTGAATCTGAACATATGTTTATTAAGAGGATTGCTGCTGCGGTCTCCAAATGGATTCACCTTGGTTCTTTACATGTTGCTGATCATTTGGTCGGGCGGGAGCTTCAAGTTCGAGAAGTGATGAAACTTTTGAAAGTTGGATTTGATGATGAGGTCTGCATGGTAGGGATCCATGGAATTGGTGGAATAGGTAAAACAACTCTTGCGCGAGCCATTTACAATTCGATTGCTCGCTCATTTGAGGGTACATGTTTTCTTGGTAATGTGAGAGAAAGTTCAGGGGCATACGGCTTGGTGTATCTCCAAAAGATAATACTTCACAAGTTAACTGGAGACACTACTATTGAGTTAGGAGATGTCAATGAAGGAATTTCAATTATAAGGCACAGGCTTTGTCAAGTGAAGGTTCTCTTGGTTGTTGATGATGCTGACAATGTGAAGCAGTTGAGAGCCATTGTTCGAGATTCTAAGTGGTTTGGCTCCGGCAGCAGAATCATTGTTACAACTCGAAACAAAGGCTTGCTAGCAAGTCATGGGGTTAGAAGAACATATGAAGTAGGGAAATTAAATGGGAAAGAATCTCGTGAATTGTTCATATGGAATGCTTTTAGAACCGATGAAGTTGATCCAAGTTATGAAGACATTTTGAATCGCATAGTTACTTTTACTTCTGGCCTACCATTGGCTTTGGAACTAATAGGTTCCAACTTATTTGGTAAAAGCAAAGAGGAATGGGAATCGGCACTACAGCAGTATAAAAGAATACCTAACAAAGAGATTCAACAAATACTCAAAGTAAGTTTTGATGATTTGGAGGAGGATGAGAAGAATTTTTTTCTTGACATTGCTTGTTTTCTAAATGGAGAAAGCTTTGAATATGTTGAACGTATACTTCACACTCACCATGGTGTTTGCCCAAAGAGTAGCATTCGAGTGTTGGTTGATAAATCTCTGGTAAAGATTGATGGTGGCATAGTAAGATTACATGATTTCATACAGGACATGGGTCAAGAAATTGTGCGACAAGAGTCACCGGAAGAGCCTAAGAAGCGCAGCAGGTTGTGGTCGTTCGAGGATATTAAGCATGTTCTAGAGGAAAATAAGGGAAGTAACAAAACTGAAATCATAGACCTGGTGTTCCCCAATTCTGATGAAAATATAAATTGGGATGGTGAAGCATTTGTGAAGATGAATAATCTCAAAACACTTATTGTTCATACGTGTTGTTCTTTAGAAGGTCCAAAAAAACTTCCAAACAGTTTAAGAGTTTTGATATGGCAATACTATCCATCACAATCTTTGCCATCTGATTTTTATCCGAAGAAACTTGTCATGATGGATTTATCTTACAGTTGCTTAAATTCGATCGAGTTACAAGAGAAGTTTGTGAATCTAAAATATCTGAGAATTGATGGCTGTAAATTAAAGCATATACCAGATGTATCTTTTGCCCCAAATTTAGAAGAATTATCATTTCGTCAATGCCAGAGTTTAATTGAAGTTCATGAATCAGTTGGATTATTGGAAAAACTTAGAGTATTGGATGCTCATGGTTGTTCTCTTCTTAAGCGTTTTCCAGACTTGATGCTCCCCACTCTTGAAGAACTCTATCTTTCAAGTTGTTCAAGTCTTAAGACTTTTCCTAAAATATTAGGAAAGATGGAAAGCTTAACAATGCTAGAGTTGATCGACACTCAAATAGCAGAATTTCCATCTTCAATTCAATATATTACTCGGCTTCAAAAACTGGTATTGGGGTTTTCTGGAATTGTTGAGTTGCCAAGTAGCATTTTTGTGTTGAAAAAACTTAAATATTTGAGTATTCAGATGTGTGATGGGTTAATACTATGTGTGCAACACGAAGGGGAAGAGGAAATGAGCTCAATGGCAATTTCAAACCAGCTACACCTTGATTTTAGAAATTGCAATTTGTCTGATGAATTCCTTCAAATAGGTGTCCCGCGGTTTTCCAATGTGAAAAAGTTAGACCTATCAATCAACAGTTTCAAGGTTCTTCCTGCTTCCATTAAGGAATGTTTCTTTTTGAAGGAACTTATTTTGGATGGTTGCTGCAATCTTGAAGAAATTAGAGGGATTCCGCCAAACATAGAAAAATTTTCTGCGAGGCACTGCAGATCCTTAAGAGAGTTGGACCTCACACTTGTTCCTGCATGCACCAAAGAATGTCATCTTTTGAAGGAACTCATTTTGGATGGTTGCAAGAATCTTAAGGAAATTAGAGGAATTCCCCAAAACATAACAGCTTTTCAGGTACCAACCTCAACCTGCACATTCGTGACATCCTCGTACAGAAGCATGTTACTGAATCAGGGACTCAATCATTCTTGCATGGGTTCATCAATATCGTTCTGGTTTCAGAACAAATTCCCTGCCATATGTCTCTGTGTCATTGCTGAACAGAGTTGTGCATCATTTTCCCTCAGAATGATAATCAATGGTCATAATGTGCCTCAGTTTTCCTGTTTTTTTCTGGAAAAGGATAATATGTTAATTATTCCACTAAGTCAAAAGCTGAAAAAGATCAATGATGAGGTGCACAATCTTCTGTTACAAAATGAGTGGAATCATGTAGAGTTGTTTAATGATCCTATTATGCAGAGACTAGGGGGGGTTGAGCCTGATGACAGCTTGCGACTTGTATTGAATGAATTCAAACCAAGTGATGCCATGGAAGATATTGAATTCACCAATCCTCTGCTGAAGAAAGAAGAGGATAAAGTGTCTCTTCCATTGCATCCGCCTCTTTCATTGAGTGATGGTGCTATTCAAATTAATGACACCACTATTGTCCAGGCATCCAAGGATCATCCAGCAAAGGCACAAGATGCAGAAATTACTGGTTGTTCCGAAAATGGACAAGAAATCCCTCTCATTCAAGATGACGACGACGATAACGATGATGTAGAAATGGAAGCATTTTATGCTTCCCTTAATGTGACCAATGTTCTTTCACATTCGCATGATAAATTTACAACCAATGCTCCGAATGAAGAGGCTAGGAATGCATTGAAAACAGTAAAAGACTTTATCATCAATAATGATGCTTCAGTGTTGCTGCATGATGAACACTACAATGTGATTCAAAATAGTTTGAATTACCTCTCCGGTTTGACTTCAAAAGATGGCATATCAGGAGAGGTGGAAACATTGGTCTCAGAAGCCTCATGGTTGTTCAATAATTGTAGTAGGGAATACGTTGAATCATGTATAAAAATTAAGTCCACGGCTTCAGAGCTACAAAGAGTTGATGAATTAGAAGCAGGATTGGAATCCAACAAGAACCGCTACAGGGAAAATGTGGCTTTAGAAAATGAGTTACGCCAAACGTTAGATTGGATGGAGAAAAAAAAAAGGAGCTGGAAGAGGAAATCAATGCTATGA 3882 0.3913 MVGEWTYDVFLSFRGKDIRQHFIGHLYEGLRGRGIHTFLDDEELERGDDITRSLLTAIQHSMIAIPVFSLNYATSSFCLDELVNIMDCADQIVLPVFYEVDPFHVRHLRGTYGEALAMHEERFKSGEEGSYMVKNMQKLEKWKTALKRAANLSGYHFKIGCESEHMFIKRIAAAVSKWIHLGSLHVADHLVGRELQVREVMKLLKVGFDDEVCMVGIHGIGGIGKTTLARAIYNSIARSFEGTCFLGNVRESSGAYGLVYLQKIILHKLTGDTTIELGDVNEGISIIRHRLCQVKVLLVVDDADNVKQLRAIVRDSKWFGSGSRIIVTTRNKGLLASHGVRRTYEVGKLNGKESRELFIWNAFRTDEVDPSYEDILNRIVTFTSGLPLALELIGSNLFGKSKEEWESALQQYKRIPNKEIQQILKVSFDDLEEDEKNFFLDIACFLNGESFEYVERILHTHHGVCPKSSIRVLVDKSLVKIDGGIVRLHDFIQDMGQEIVRQESPEEPKKRSRLWSFEDIKHVLEENKGSNKTEIIDLVFPNSDENINWDGEAFVKMNNLKTLIVHTCCSLEGPKKLPNSLRVLIWQYYPSQSLPSDFYPKKLVMMDLSYSCLNSIELQEKFVNLKYLRIDGCKLKHIPDVSFAPNLEELSFRQCQSLIEVHESVGLLEKLRVLDAHGCSLLKRFPDLMLPTLEELYLSSCSSLKTFPKILGKMESLTMLELIDTQIAEFPSSIQYITRLQKLVLGFSGIVELPSSIFVLKKLKYLSIQMCDGLILCVQHEGEEEMSSMAISNQLHLDFRNCNLSDEFLQIGVPRFSNVKKLDLSINSFKVLPASIKECFFLKELILDGCCNLEEIRGIPPNIEKFSARHCRSLRELDLTLVPACTKECHLLKELILDGCKNLKEIRGIPQNITAFQVPTSTCTFVTSSYRSMLLNQGLNHSCMGSSISFWFQNKFPAICLCVIAEQSCASFSLRMIINGHNVPQFSCFFLEKDNMLIIPLSQKLKKINDEVHNLLLQNEWNHVELFNDPIMQRLGGVEPDDSLRLVLNEFKPSDAMEDIEFTNPLLKKEEDKVSLPLHPPLSLSDGAIQINDTTIVQASKDHPAKAQDAEITGCSENGQEIPLIQDDDDDNDDVEMEAFYASLNVTNVLSHSHDKFTTNAPNEEARNALKTVKDFIINNDASVLLHDEHYNVIQNSLNYLSGLTSKDGISGEVETLVSEASWLFNNCSREYVESCIKIKSTASELQRVDELEAGLESNKNRYRENVALENELRQTLDWMEKKKRSWKRKSML 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30266g00026 1293 SUPERFAMILY L domain-like 544 906 - -
Stsc30266g00026 1293 FunFam Disease resistance protein (TIR-NBS-LRR class) 3 181 - -
Stsc30266g00026 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 442 IPR027417 -
Stsc30266g00026 1293 Coils Coil 1246 1266 - -
Stsc30266g00026 1293 Pfam NB-ARC domain 195 424 IPR002182 GO:0043531
Stsc30266g00026 1293 ProSiteProfiles TIR domain profile. 5 179 IPR000157 GO:0007165
Stsc30266g00026 1293 Gene3D - 3 178 IPR035897 -
Stsc30266g00026 1293 Gene3D Ribonuclease Inhibitor 703 924 IPR032675 -
Stsc30266g00026 1293 SMART till_3 6 152 IPR000157 GO:0007165
Stsc30266g00026 1293 SUPERFAMILY "Winged helix" DNA-binding domain 418 525 IPR036390 -
Stsc30266g00026 1293 Gene3D - 348 432 IPR042197 -
Stsc30266g00026 1293 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 774 IPR044974 GO:0006952
Stsc30266g00026 1293 Gene3D - 179 341 IPR027417 -
Stsc30266g00026 1293 PRINTS Disease resistance protein signature 688 704 - -
Stsc30266g00026 1293 PRINTS Disease resistance protein signature 290 304 - -
Stsc30266g00026 1293 PRINTS Disease resistance protein signature 383 397 - -
Stsc30266g00026 1293 PRINTS Disease resistance protein signature 214 229 - -
Stsc30266g00026 1293 Pfam TIR domain 7 178 IPR000157 GO:0007165
Stsc30266g00026 1293 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 155 IPR035897 -
Stsc30266g00026 1293 Gene3D Ribonuclease Inhibitor 489 702 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30266g00026 Stsc-Chr30266 101395 106457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30266g00026 7 771 WRKY Transcription Factor Family AT4G12020 31.030 1.37e-73 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30266g00026 - - adu:110281223 1418.29