Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30266g00014 ATGGTTCAAGAGAAGTTGAAGAAAGGAGAGAAAAGAACTAAGCTGAGATTGCCACCAGGAAGAAGAGGATGGCCTTTGATTGGTGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGGAAGATATTTTCTTGCAGCCTATTTGGGAAATGGGCAGTGGTGTCTGCAGATCCAACCTTCAACCGGTTTGTGATGCAAAACGAAGGGAAACTATTCCGGTCGAGTTATCCCAAATCATTCAGAGACTTGGTTGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAGCAGAGGAAGCTGCATGGAATCGCCTCGAATATGATGCGCCTCGAGAAGCTCAAGTTCCATTTCTTGAATGATATACAGAAGGTCATGCTCCAAACTTTGAGCAATTTTGAGAACAACCAAGTCATTCTTCTCCAAGATGTTTGTAGAAAGGTAGCAATTAACTTAATGGTTAATCAGCTATTAGGGGTTTCAAGTGAATCACAAATCAATGAAATGGCTCAGTTTTTCTCTGACTTTGTTGATGGTTGTCTTTCAATTCCAATCAACACACCAGGATTTGCATACCACACTGCTATGAAGGCAAGGGAGAAAATCATAAACAAGATAAACAAGACCATAGAGGTGCACAGAAAAAATGGTTCTCCAACTGCAGGGAGTGGTGTGCTTGGAAGGCTGCTAGAGGAAGAAAGCTTGCCGGACGATGCCGTAGCAGACTTCATCATCAATCTTCTCTTTGCCGGGAACGAAACCACGACGAAAACAATGCTTTTTGCAGTCTATTTCCTCACTCAATGTCCTCAAGCCATGAAGCAACTTCTGGATGAACAAGATTCTCTAAGGAGTAGCTCCGGAGAAGAATTTCTTACATGGCAGGATTACAAAGCAATGCCTTTCACTCAGTGTGTTATTGATGAAACACTTAGACTTGGGGGAATTGCAATTTGGTTGATGAGAGAAGCAAAAGAAGACATTCAATACCAAGATTTTGTTATTCCAAAAGGATGCTTTGTAGTTCCATTTCTTTCAGCAGTCCATTTAGATGAGAATGTGTATAATGGAGCTCTAAACTTCAATCCATGGAGATGGATGGAACCTGAAAATGAGGTAATTCCACCCGCCGCGGCTCGCTCCCTCGAGTGCATAGTTAGTTACATGAATTGTGATGTCAAAACTGGTTGA 1230 0.4211 MVQEKLKKGEKRTKLRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPTFNRFVMQNEGKLFRSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMLQTLSNFENNQVILLQDVCRKVAINLMVNQLLGVSSESQINEMAQFFSDFVDGCLSIPINTPGFAYHTAMKAREKIINKINKTIEVHRKNGSPTAGSGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPQAMKQLLDEQDSLRSSSGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDIQYQDFVIPKGCFVVPFLSAVHLDENVYNGALNFNPWRWMEPENEVIPPAAARSLECIVSYMNCDVKTG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30266g00014 409 PRINTS E-class P450 group IV signature 254 280 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30266g00014 409 PRINTS E-class P450 group IV signature 362 380 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30266g00014 409 PRINTS E-class P450 group IV signature 44 67 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30266g00014 409 PRINTS E-class P450 group IV signature 313 329 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30266g00014 409 Gene3D Cytochrome P450 6 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30266g00014 409 PANTHER CYTOCHROME P450 26 13 388 - -
Stsc30266g00014 409 Pfam Cytochrome P450 18 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30266g00014 409 SUPERFAMILY Cytochrome P450 12 389 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30266g00014 Stsc-Chr30266 61092 63117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30266g00014 6 385 Cytochrome P450 AT1G73340 73.037 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30266g00014 - - lja:Lj2g3v0561120.1 718.383