Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30266g00001 ATGGATTCCACTGATCGAGTTCATATGGTGGGGATACATGGAATTGGTGGAATAGGTAAAACAACTCTTGCTCTAGCCATTTATAACTCAATTGCTGACTATTTTGAGGGTTTGTGCTTTCTTGCAAATGTGAGAGAGAATTCAAATAAATATGGGTTGACACATCTTCAAAATATCCTTCTCTCTGAGATATTTGGAAATAAGGAAGTTAAGGTAGCCAGTGTTCAACATGGAACTTTGATAATCCAACGAAGGCTTTCTCGAAAGAAAATTCTTTTGATTCTAGATGATGTTGATGATCACAAGCAGCTACAGGCTATTGCTGGAAAACTTGATTGGTTTGGTCCTGGTAGCAGAGTTATTATTACAACACGGGACACACATTTGCTAAAATGTCATGGTGTTGAAAAGTTGCATGAGGTACAGGGGTTAAATGAGGCAGAGTCTTTTCAGTTGCTTATTAAAAAAGCTTTTCAAAATGATGAGGTTAGCCCAAGTTATGCAGGTGTTTTAAATCGTGTAATAACTTATGCCTCTGGACATCCATTTGCTTTGGAAATAGTAGGCTCCAATTTGTTTGGAAAAGAAGTAGAAGATTGGGAATCCGCATTGCAACAGTATGAAAGAATTCCTAATGGGAAGATCCAACAAATACTTAAAATAAGTTATGATGCTTTGGAGGAAAGTGAGCAGAATATTTTTCTTGATATCACTTGTTGCTTTAAAGGATATAACTTGACAAAAATTAGAGATATACTTCATGCTCATTATGGAGATGACATGAGATATCATACTCAACAGTTGGTTGATAAATCTCTTATAAAGATTAATAAGCTTTGGCATCAATTGACATTTCATGATTTGATAGAGGACATGGGCAAAGAAATTGTTCGTCAAGAATCACCAAAAGTGCCAGGAAAGCGCAGTAGGTTATGGTTTCATGAAGATATAGTTCAAGTTCTGGAAGAAAATCAAGGGACTAGCGCAGTTGAGATCATATATTTTGGAATTTCCCTTGGCAAAAATGGACGAAAAGGAGAAGAATGA 1047 0.361 MDSTDRVHMVGIHGIGGIGKTTLALAIYNSIADYFEGLCFLANVRENSNKYGLTHLQNILLSEIFGNKEVKVASVQHGTLIIQRRLSRKKILLILDDVDDHKQLQAIAGKLDWFGPGSRVIITTRDTHLLKCHGVEKLHEVQGLNEAESFQLLIKKAFQNDEVSPSYAGVLNRVITYASGHPFALEIVGSNLFGKEVEDWESALQQYERIPNGKIQQILKISYDALEESEQNIFLDITCCFKGYNLTKIRDILHAHYGDDMRYHTQQLVDKSLIKINKLWHQLTFHDLIEDMGKEIVRQESPKVPGKRSRLWFHEDIVQVLEENQGTSAVEIIYFGISLGKNGRKGEE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30266g00001 348 Gene3D - 1 137 IPR027417 -
Stsc30266g00001 348 SUPERFAMILY "Winged helix" DNA-binding domain 214 322 IPR036390 -
Stsc30266g00001 348 PRINTS Disease resistance protein signature 178 192 - -
Stsc30266g00001 348 PRINTS Disease resistance protein signature 85 99 - -
Stsc30266g00001 348 PRINTS Disease resistance protein signature 9 24 - -
Stsc30266g00001 348 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 321 IPR044974 GO:0006952
Stsc30266g00001 348 Gene3D - 143 232 IPR042197 -
Stsc30266g00001 348 Pfam NB-ARC domain 8 228 IPR002182 GO:0043531
Stsc30266g00001 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30266g00001 Stsc-Chr30266 3189 4403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30266g00001 7 325 WRKY Transcription Factor Family AT5G45050 34.154 6.71e-52 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30266g00001 - - ahf:112749299 449.514