Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30263g00028 ATGATGACAATTGAGGCAACCATGGATAAATCTGTGCTCGATGACGTCATTAGGAGGTTGCTCGATGGCAAGGGAGGCAAGCAAGTCCAGCTCTCTGAATCCGAGATCCGTCAGCTTTGCGTCAACGCCAGACAAATCTTCCTCTCTCAGCCCATCCTCCTTGATCTCCAGGCTCCCATCCGCATCGGCGGTGACATACATGGCCAGTACCAAGATTTGTTGAGGCTTTTCGAATACGGCGGGTATCCTCCAACCGCAAATTACTTANNNNNNNNNNGTCTGGAGACCATATGCTTGCTTTTGGCCTACAAGATTAGATATCCTGACAGGGTTCACCTCCTCAGAGGAAACCACGAAGACGCCAAAATTAACCGGATATACGGCTTCTATGATGAGTGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACAGATTGCTTTAACTGTTTGCCGGTAGCCGCACTCATTGATGGCAAAATACTCTGTATGCATGGCGGACTCTCTCCTGAATTGCAGACTTTGAATCAGATAAGGGAGATTTCAAGGCCTACTGAGATTCCAGATAGCGGTCTACTATGCGATCTCCTCTGGGCCGATCCCGATCCTAGCCTCGACGGTTGGGCAGATAGCGACAGAGGCATTTCCTGCACTTTTGGTCCTAATGCTGTTACCGAGTTTTTGGATAAAAATGACCTTGATCTCGTTTGCAGAGGTCATCAGGTTGTGGAGGATGGATATGAATTCTTTGCTAAACGAAGATTAGTCACCATATTCTCTGCTCCGAATTATGGTGGCGAGTTTGACAATGCCGGTGCATTGTTGAGTGTTGATGAATCTCTTGTTTGTTCCTTTGAGATATTGAAACCGGTGGATAAAGGATCCTCATCAAAGGTTGCTCTTAAAAAGCCACCTAAAATTGGTAAGGTATAG 936 0.4562 MMTIEATMDKSVLDDVIRRLLDGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLQAPIRIGGDIHGQYQDLLRLFEYGGYPPTANYLXXXXLETICLLLAYKIRYPDRVHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQTLNQIREISRPTEIPDSGLLCDLLWADPDPSLDGWADSDRGISCTFGPNAVTEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPVDKGSSSKVALKKPPKIGKV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30263g00028 311 SMART pp2a_7 31 293 IPR006186 GO:0016787
Stsc30263g00028 311 Pfam Serine-threonine protein phosphatase N-terminal domain 13 57 IPR031675 -
Stsc30263g00028 311 FunFam Serine/threonine-protein phosphatase 5 301 - -
Stsc30263g00028 311 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 301 - -
Stsc30263g00028 311 Pfam Calcineurin-like phosphoesterase 64 243 IPR004843 GO:0016787
Stsc30263g00028 311 ProSitePatterns Serine/threonine specific protein phosphatases signature. 114 119 IPR006186 GO:0016787
Stsc30263g00028 311 Gene3D - 5 301 IPR029052 -
Stsc30263g00028 311 PRINTS Serine/threonine phosphatase family signature 113 137 IPR006186 GO:0016787
Stsc30263g00028 311 PRINTS Serine/threonine phosphatase family signature 176 203 IPR006186 GO:0016787
Stsc30263g00028 311 PRINTS Serine/threonine phosphatase family signature 255 271 IPR006186 GO:0016787
Stsc30263g00028 311 PRINTS Serine/threonine phosphatase family signature 147 173 IPR006186 GO:0016787
Stsc30263g00028 311 PRINTS Serine/threonine phosphatase family signature 233 253 IPR006186 GO:0016787
Stsc30263g00028 311 PRINTS Serine/threonine phosphatase family signature 80 107 IPR006186 GO:0016787
Stsc30263g00028 311 SUPERFAMILY Metallo-dependent phosphatases 8 294 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30263g00028 Stsc-Chr30263 149909 151849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30263g00028 54 237 Calmodulin-binding Proteins AT5G63870 30.396 4.29e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30263g00028 K06269 - gmx:100805030 553.903