Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30262g00009 ATGGTTAGTGCTGATGAACAACGCATGCATGTGATGCTTTCTAAGAAGTTGTTGGTTCTATTAATTCTGCTCTCAGTTTCATATTCATTGGCTTCAGCATCTCTGGCTGTGGGTTTCTATAAAAGAACATGTCCACATGCTGAAGCAATTGTGAGAAGCACCGTGAACAAAGCCATTTCCCTTAACCCGGGAATTGCTCCTGCCTTGATTAGAATGCACTTTCATGATTGCTTTGTGAGGGGTTGTGACGGTTCCATATTACTAGAATCCACACCTGGAAACCCAGCTGAGAGAGAACACCCAGCCAACAACCCAAGCCTACGTGGCTTTGACGTCATCCAAGAAGCCAAGGCCCAAATAGAGTCCCTCTGCCCAGAAACAGTGTCGTGCGCAGACATTCTCGCCTTCGCCGCACGCGACAGCGCCTACAAATCCGGCGCCATAAACTACGCCGTACCAGCAGGCCGCCGAGACGGCCGAGTCTCCATCAGCCAAGAGGTAACACAAAACCTACCCGCACCAAGCTTCAACGCAACACAACTCATAACCAACTTCGCAAGAAAAGGACTCTCCGTTGATGAAATGGTTACGCTCTCAGGTGCGCATTCAATTGGTGTATCTCATTGTTCTTCGTTCTCCAACCGCTTGTATACACCCGCGCCTCAAGACCCTACCATGGACTCCGAGTTTTCGTCGGTTTTGAAAACCACGTGTCCTAATTCCGGCGGTGGATTATTATTTGATCCGACGGTGGTGCTTGACGCATTTACGCCGAAGAGGTTGGATAATAAGTACTATAAGGGATTGATAAAGCAGCGGGGGTTGTTGAGTTCGGATCAAGCGTTGTGGAGTAGTGGATCAACGAGGAAAATGGTGGTGAGAAATGCTAAACATGGTTTGAATTGGTCAGTGAAGTTTGCGAAGGCTATGGTTCGTATGGGGTTCATTGATGTGCTCGCAGGTGAAGAAGGGGAGATTAGGAGGCAGTGTAACGTCGTTAATTAA 1005 0.4826 MVSADEQRMHVMLSKKLLVLLILLSVSYSLASASLAVGFYKRTCPHAEAIVRSTVNKAISLNPGIAPALIRMHFHDCFVRGCDGSILLESTPGNPAEREHPANNPSLRGFDVIQEAKAQIESLCPETVSCADILAFAARDSAYKSGAINYAVPAGRRDGRVSISQEVTQNLPAPSFNATQLITNFARKGLSVDEMVTLSGAHSIGVSHCSSFSNRLYTPAPQDPTMDSEFSSVLKTTCPNSGGGLLFDPTVVLDAFTPKRLDNKYYKGLIKQRGLLSSDQALWSSGSTRKMVVRNAKHGLNWSVKFAKAMVRMGFIDVLAGEEGEIRRQCNVVN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30262g00009 334 CDD secretory_peroxidase 35 333 IPR033905 GO:0004601|GO:0042744
Stsc30262g00009 334 SUPERFAMILY Heme-dependent peroxidases 35 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 FunFam Peroxidase 38 180 - -
Stsc30262g00009 334 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Stsc30262g00009 334 ProSiteProfiles Plant heme peroxidase family profile. 34 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 Pfam Peroxidase 51 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Stsc30262g00009 334 Gene3D Peroxidase, domain 2 172 313 - -
Stsc30262g00009 334 PANTHER PEROXIDASE 25-RELATED 24 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30262g00009 334 FunFam Peroxidase 172 313 - -
Stsc30262g00009 334 Gene3D - 38 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30262g00009 Stsc-Chr30262 73712 75671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30262g00009 19 334 Peroxidase AT1G05260 46.386 1.64e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30262g00009 K00430 - qsa:O6P43_010907 444.506