Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30262g00005 ATGTGCCAAAACGCTGAGAACAAAACTCTTTGCCATGAGATCTTGAAGCCCGTGAAGGACGCCACTGACCCCAATGAATTCATTGGGGCTGTTGTGAAAGCCGCCACGGAAAGCGTCATCAAGGCCTTGAACATGAGTGACAGTCTGTCGGTTGAAAAAGGAAGCAATAACCCAGGCATAAAGATGTCATTGGATGATTGCAAAGACCTCTTGCAATCAGCCCTACACAGCCTCGAAAATTCCGCATCCTTGGTGGAACAGAACAATATCAAGGCACTTCATGACCAGTCCGCCGACTTCAGGAACTGGCTAGGCGCTGTCATCTCCTACCAACAAACCTGCCTCGACAACTTCAACGAAACCGACGTCGACGGTGAGAAGGCCATCAAGGATCAGCTTAACGCCCAGAGCTTAGACGAAATTATGCAGGTAACAGGAATCGCTCTTGATTTGGCCGCCGATTTGGACAGAATCCTCGAGCAGTTCAACTTGAGGCTCGATGTCCATCCCGGTTCTCGCCGCCTTCTGGCCTTGGATATCGACCAGCAAGGACTCCCGACCTGGCTCTCAGAGTCAGACAGGGAGCTCTTGGCTAAAGTCGACCTCCACTTGGCTAGAAGGAACTTAGGCAGTAAGAACATGGGGAAAGGAAAAGGAGGAAAAGGAAATCGTAAGGGTAAAGGCAAGGGCAAAGGCAAAGGCGGCAAAGGTAAAGCTATGGCTGCTGGTGCCGCTGCTGGTGCTGCCGCCGGTGCTGCTGCCGGTGCTGCCATTACTTTTTCTCCTGGATCCATTGAACCGGTGACCCCGGGACCAGCCCACGTGGTGGTTGCTCAGGATGGAAGTGGCAGGTTCAGGACTATCACGGAAGCTATTAATTCTTACCCAGCTGGCTTTAAGGGCAGATACGTCATTTACGTTAAGGCTGGTATCTATAACGAGTTCTTTATTATTCCTAGCACCGCAGTCAACATTCTTATGTACGGTGATGGCCCTACAAGGACTATTGTCACTGGCCGTAAGAACTTTGCTGAAGGCGTGAAAACAATGCATACCTCCACATTTGCCAATACTGCTGATGGGTTCATTGCTAAGGGAATGAGGTTCGAAAACACGGCTGGTCCCAAAGGACACCAAGCTGTGGCACTCCGAAACCAGGGAGACAAATCGGCTTTCTTCCAATGCCAGATCTTCGGTAACCAAGACACCTTGTATGTCCAAACCAACCGTCAGTTTTTCCGCGACTGCGAGATCTCCGGCACCATCGACTTCATCTTCGGCACATCTGCAACCTTGATCCAAAACTGCAAGATCATCCTCAGGAAGCCTGACCCTAAACAAGCCAACACCGTTACTGCCGACGGAACAATGCAACCCAACATGCCCACCGGAATCGTCCTCCAGAACTGCGAGATTGTCCCTGAGCCCGCCCTCTTCCCCGACAGGTTCACCATCAAGTCATACTTGGGTAGGCCATGGAAGCCTTACTCAAAGACTGTGATCATGGAATCAATGATCAGTGATGCAATTCAGTCTGATGGGTGGTTCCCTTGGGCTGGAACCGTACACCTTGATACTCTGTACTATGCTGAGTTTGCTAATAGCGGACCTGGTTCCAATGTCCAAGGAAGGATTAAGTGGAAGGGATATCAAGGACTCATTAGTAAGGATGTGGCTGCAAGGTACACTGCTGGAAGATTTCTCGGAGCTGGACCAGGTAGCAATGCTGAACAATGGTTGGGTGCTACTGGCCTTCCTTTTACCATTGGCTTTACCAAGGCTTAA 1785 0.5048 MCQNAENKTLCHEILKPVKDATDPNEFIGAVVKAATESVIKALNMSDSLSVEKGSNNPGIKMSLDDCKDLLQSALHSLENSASLVEQNNIKALHDQSADFRNWLGAVISYQQTCLDNFNETDVDGEKAIKDQLNAQSLDEIMQVTGIALDLAADLDRILEQFNLRLDVHPGSRRLLALDIDQQGLPTWLSESDRELLAKVDLHLARRNLGSKNMGKGKGGKGNRKGKGKGKGKGGKGKAMAAGAAAGAAAGAAAGAAITFSPGSIEPVTPGPAHVVVAQDGSGRFRTITEAINSYPAGFKGRYVIYVKAGIYNEFFIIPSTAVNILMYGDGPTRTIVTGRKNFAEGVKTMHTSTFANTADGFIAKGMRFENTAGPKGHQAVALRNQGDKSAFFQCQIFGNQDTLYVQTNRQFFRDCEISGTIDFIFGTSATLIQNCKIILRKPDPKQANTVTADGTMQPNMPTGIVLQNCEIVPEPALFPDRFTIKSYLGRPWKPYSKTVIMESMISDAIQSDGWFPWAGTVHLDTLYYAEFANSGPGSNVQGRIKWKGYQGLISKDVAARYTAGRFLGAGPGSNAEQWLGATGLPFTIGFTKA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30262g00005 594 CDD PMEI-like_3 1 157 - -
Stsc30262g00005 594 MobiDBLite consensus disorder prediction 210 236 - -
Stsc30262g00005 594 MobiDBLite consensus disorder prediction 218 234 - -
Stsc30262g00005 594 PANTHER PECTINESTERASE 1 581 - -
Stsc30262g00005 594 SUPERFAMILY Pectin lyase-like 272 589 IPR011050 -
Stsc30262g00005 594 Gene3D - 272 591 IPR012334 -
Stsc30262g00005 594 NCBIfam pectinesterase inhibitor domain 1 150 IPR006501 GO:0004857
Stsc30262g00005 594 SMART PMEI_2 1 151 IPR006501 GO:0004857
Stsc30262g00005 594 FunFam Pectinesterase 269 591 - -
Stsc30262g00005 594 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 133 IPR035513 -
Stsc30262g00005 594 Pfam Plant invertase/pectin methylesterase inhibitor 1 151 IPR006501 GO:0004857
Stsc30262g00005 594 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 157 IPR035513 -
Stsc30262g00005 594 Pfam Pectinesterase 274 569 IPR000070 GO:0030599|GO:0042545
Stsc30262g00005 594 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30262g00005 Stsc-Chr30262 52219 55329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30262g00005 1 591 Carbohydrate Esterase AT3G62170 35.158 4.17e-105 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30262g00005 K01051 - gmx:100789650 466.077