Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30259g00026 ATGGATATTACCGACACGCCACGGAATAGTGACACAGATACTGATCTATATCCACTGCTGATGGAGCAGTTGGTATCCCACGATGATCATCAGCACATAATTGATATTACAAGGAGCAATGATGCGTTATCCAACTCATCTAATAATCAACGCCCTGCAGTGCATGAAAATCGAACTAGTGTCAGCACCGATGTCCCTACCCGTGAAACATCTTCGTTTTCTTCACCTAGATTTAGTCCTAGAAGTTCTACATCGACAAGAGGTGAGGGGTACAATCATCGCAGAAGGAGCCCACTAAATTCTGGTCTATGGATTTCTGTAGAGCTTGTTGTCACTTTGGGTCAGATCATATCATCTGTTGTTGTCTTGTCACTATCAAGAGATGAACATCCCCAAGCCCCATTATTTGCATGGATTGTGGGTTATGCAGCTGGTTGTTTTGCTACACTTCCTATTCTTTACTGGCGATACCGAAACTATAACCAAAGTGCAGAACAAGATATATCCCAATCATCTCAAGGTTCTTTAAGCAACCCTTCAGATACTACATATACTGCCATATCTGTTGCCCATAATTCAAACAACCACAGCAGTCATTCTACAGAATTGTCTGCGAGAAGTGCTAGAATTCCTGGAGCGTTTAGTTCTAGGTTTAATGGATTAGTAGACCATTTCAAAATGGCCTTGGATTGCTTCTTTGCAATTTGGTTTGTTGTAGGCAATGTTTGGATCTTTGGAGGTCACTCTTCTCCATCCGATGCTCCAAAATTGTATAGGTTATGTATAGTCTTCCTTACCTTCAGCTGCATTGGATATGCCATGCCCTTTATACTGTGTGCAACAATTTGTTGCTGCCTACCTTGCATTATTTCTGTTTTCGGCATTCCTGAGGATTTTTCACCAAACAGAGGAGCCTCAATAGAATCCATTAACGCTCTGCCAATCTATAAGTTCAAATTGAAGAAAAATGATGATAGTGGTGTTGAGGATGTCAATACTGCTGCTGAAGATGATGGTGGAATTCTGGTCGCTGGGACAGAAAAGGAACGGCCTATATCAGGAGAAGATTCTGTAAGTTCCTGTAGGATATGTTGGGTAGTAGTCATACTTCAGGCAATGTTGTTTAGGTTTAAGCATTCAATAATTAGTGTGTTTGAGAAATATCAGGTAATGATTCTTGCTACCCTCACGCACCTGCGGGTAAAAATGAAAGGGAAAGCAGACCAGACCTATGTCTTTATCTCTTGA 1248 0.4127 MDITDTPRNSDTDTDLYPLLMEQLVSHDDHQHIIDITRSNDALSNSSNNQRPAVHENRTSVSTDVPTRETSSFSSPRFSPRSSTSTRGEGYNHRRRSPLNSGLWISVELVVTLGQIISSVVVLSLSRDEHPQAPLFAWIVGYAAGCFATLPILYWRYRNYNQSAEQDISQSSQGSLSNPSDTTYTAISVAHNSNNHSSHSTELSARSARIPGAFSSRFNGLVDHFKMALDCFFAIWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVFGIPEDFSPNRGASIESINALPIYKFKLKKNDDSGVEDVNTAAEDDGGILVAGTEKERPISGEDSVSSCRICWVVVILQAMLFRFKHSIISVFEKYQVMILATLTHLRVKMKGKADQTYVFIS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30259g00026 415 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 364 - -
Stsc30259g00026 415 MobiDBLite consensus disorder prediction 38 87 - -
Stsc30259g00026 415 MobiDBLite consensus disorder prediction 38 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30259g00026 Stsc-Chr30259 156888 160965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30259g00026 1 364 C3H Transcription Factor Family AT1G80400 53.369 1.33e-134 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30259g00026 - - aip:107614650 529.635