Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30259g00022 ATGGGAAATATTGGTAATGTTATAAATGGGCTTAAGCCTGCATTTGGGATGATAATTGTTCAAGTTGCTTATGCTGGTCTAAGTATATTATACAAATTGGTTGTGGAAGATGGTATGAGTATGAGTGTTCTCATTGCCTATAGAACCCTAATTGCCACATCTTTTGTTGTTCCTCTTGCATTCTTCATGGAAAGGAAGACCAAGCCAAAAATTACACCAGAAGTACTCCTTCAATCATTCTTTTGTGGATTATTTGGGGTAACTTTACAACAAAATCTATATGTGGGAGCAGTGGCTTTTGCATCAGCAACATATGCTACAGCCATGACCAACCTTATTCCTGGTGTTACGTTCATCCTAGCCCTCTGTTTTGGATTAGAAAGGTTGAAGATTAGAACATTAACAGGGAAGGCTAAGGTTGTTGGCACTGTAATGGGAATTGGTGGAGTCATGATCATCACATTCTATAAGACCAGAGAGATTCACATTTGGCCAACACATCATCTCAATTTCAAGAACAACAATGACCAATCACACATTTCTCCTACTAATCAATTTTTGGGTTCTGCTTTTGGTTTTGGAAATTGTTTATGCTATTCAATGTGGTTGATCATTCAGGGTAGGATGAGTGAAAAATTCCCCTGGCAATATTCAAGTGCAGCATTGGTGTCAGGGATGGCATGTATTCAAGTAATTATATTTGCTCTTTGCATGGAAAGAAATTGGAATCAATGGAGGATTGGATGGAACATCAAACTCCTCACTATAATTTATACGGGAATAGTGCCATCTGGAATAGCTTTGGTTCTGATTTCATGGTGTGTGAGATTAAGAGGACCACTTTATGCTTCAACTTTCAACCCTCTTTCTCTTGTCATAGTTACAATTGCTGCCTCTTTAATTTTGGATGAAAGGCTCTTTGTAGGAAGCTTAATAGGCTCAATATTAGTAGTGTTGGGGCTATACACAGTTTTGTGGGGTAAAGGCAAAGAATATGAGAGCATGGCAAAGGAGAAGCTTACAAAAGTAGTCTCATCTAATGGCCAAACATTGAAGATTATTATCACCACAAATAATCATAGTGATAATAATATTAATCATAATAATGGAAGTGATTACATGAAGTTATCAAGAGAAGGACATCAACAAAATGGAGTTAAAGATTGTTCAAATAATAAAGGAAACCATGGAAATGAAGGAAAGTTAACTCCATTGAACAATGGGGACTCAAAACCTACTATCTAG 1245 0.3687 MGNIGNVINGLKPAFGMIIVQVAYAGLSILYKLVVEDGMSMSVLIAYRTLIATSFVVPLAFFMERKTKPKITPEVLLQSFFCGLFGVTLQQNLYVGAVAFASATYATAMTNLIPGVTFILALCFGLERLKIRTLTGKAKVVGTVMGIGGVMIITFYKTREIHIWPTHHLNFKNNNDQSHISPTNQFLGSAFGFGNCLCYSMWLIIQGRMSEKFPWQYSSAALVSGMACIQVIIFALCMERNWNQWRIGWNIKLLTIIYTGIVPSGIALVLISWCVRLRGPLYASTFNPLSLVIVTIAASLILDERLFVGSLIGSILVVLGLYTVLWGKGKEYESMAKEKLTKVVSSNGQTLKIIITTNNHSDNNINHNNGSDYMKLSREGHQQNGVKDCSNNKGNHGNEGKLTPLNNGDSKPTI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30259g00022 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 330 - -
Stsc30259g00022 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Stsc30259g00022 414 PANTHER WAT1-RELATED PROTEIN 13 335 IPR030184 GO:0016020|GO:0022857
Stsc30259g00022 414 MobiDBLite consensus disorder prediction 364 414 - -
Stsc30259g00022 414 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Stsc30259g00022 414 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30259g00022 Stsc-Chr30259 119676 124339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30259g00022 1 364 Nodulin-like Gene Family AT1G68170 38.420 5.51e-83 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30259g00022 - - aprc:113856022 446.817